RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LTC4SQ16873 150 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 GCNT2Q8N0V5 402 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 C12orf76Q8N812 135 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MRPL24Q96A35 216 aaKnown RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 LPAR4Q99677 370 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 EMC6Q9BV81 110 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 GPR84Q9NQS5 396 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MRM2Q9UI43 246 aaKnown RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 TTC3P53804 2025 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 TRAV1-1A0A0B4J248 108 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 PRSS37A4D1T9 235 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 SPRY1O43609 319 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 PLGLB1Q02325 96 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 OTOSQ8NHW6 89 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 EID2BQ96D98 161 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MISP3Q96FF7 219 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 OR8B4Q96RC9 309 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 ATP5SQ99766 215 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 TIMM29Q9BSF4 260 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 NRSN2Q9GZP1 204 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 CCL26Q9Y258 94 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 FAM157AC9JC47 383 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 CYR61O00622 381 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 S100A7P31151 101 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 SRSF3P84103 164 aaKnown RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF684Q5T5D7 378 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 C9orf135Q5VTT2 229 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 HOGA1Q86XE5 327 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 VN1R17PQ8TDU5 208 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 NANOS1Q8WY41 292 aaKnown RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 ROBO4Q8WZ75 1007 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MOB1AQ9H8S9 216 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 B9D1Q9UPM9 204 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 PRSS38A1L453 326 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 CLEC18AA5D8T8 446 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF737O75373 536 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 SYNGR4O95473 234 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-213ENST00000537002 LHX8Q68G74 356 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MKXQ8IYA7 352 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 CLEC18CQ8NCF0 446 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 C20orf144Q9BQM9 153 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 CHODLQ9H9P2 273 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
PTPRD-213ENST00000537002 MDC1Q14676 2089 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TCRBV21S2A2A0A5A6 115 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 LINC01553A4QN01 128 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ANKRD30BLA7E2S9 258 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 FCN1O00602 326 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SLC25A6P12236 298 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TCEAL8Q8IYN2 117 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR10AC1Q8NH08 325 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 RHBDD1Q8TEB9 315 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TSPAN32Q96QS1 320 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 DMRTA2Q96SC8 542 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 DAPP1Q9UN19 280 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TRAV8-7A0A075B6U6 113 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 K7ERU9 68 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TNFRSF10CO14798 259 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PIN1P1O15428 100 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 EFSO43281 561 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ADAM20O43506 726 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 RPS4Y1P22090 263 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF117Q03924 483 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 HGFACQ04756 655 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 CATR1Q13166 79 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 HNRNPA1L2Q32P51 320 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 BSXQ3C1V8 233 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF506Q5JVG8 444 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 LEMD1Q68G75 181 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR4N2Q8NGD1 307 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR5L2Q8NGL0 311 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 AQP3Q92482 292 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SLC26A1Q9H2B4 701 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 C19orf25Q9UFG5 118 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PPP1R3CQ9UQK1 317 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 COX5AP20674 150 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 BTG2P78543 158 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SRYQ05066 204 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 FAM166AQ6J272 317 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR4B1Q8NGF8 309 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR1P1Q8NH06 330 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR4A16Q8NH70 328 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PINX1Q96BK5 328 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 BOD1Q96IK1 185 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SLC46A1Q96NT5 459 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 RARRES2Q99969 163 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ULBP2Q9BZM5 246 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 MED29Q9NX70 200 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TNS1Q9HBL0 1735 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms