RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 CALML5Q9NZT1 146 aa4.84□□□□□ -1.63
CCDC60-203ENST00000536742 PRDM4Q9UKN5 801 aa4.84□□□□□ -1.63
CCDC60-203ENST00000536742 MUC2Q02817 5179 aa4.84□□□□□ -1.64
CCDC60-203ENST00000536742 A0A087X002 238 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 RNF103-CHMP3A0A140T963 221 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 C15orf61A6NNL5 157 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 VGLL3A8MV65 326 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 F8VVB4 439 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 F8VWA3 439 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 H3BSA7 217 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 OR10H3O60404 316 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 SERPINB7O75635 380 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 NXPH2O95156 264 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 BRI3O95415 125 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 AK1P00568 194 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 NQO1P15559 274 aaKnown RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 IL12AP29459 219 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 FRKP42685 505 aaPredicted RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 SLC7A2P52569 658 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 PAX9P55771 341 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 HBA1P69905 142 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 CYCSP99999 105 aaKnown RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 PAGE3Q5JUK9 113 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 THEM4Q5T1C6 240 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 C1orf146Q5VVC0 180 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 ANKRD26P1Q6NSI1 321 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 NANOGP8Q6NSW7 305 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 BTN2A1Q7KYR7 527 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 C6orf120Q7Z4R8 191 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 GPR141Q7Z602 305 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 C5orf24Q7Z6I8 188 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 HOGA1Q86XE5 327 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 OSR2Q8N2R0 312 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 PRSS35Q8N3Z0 413 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 PNKDQ8N490 385 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 TMEM99Q8N816 258 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 RASSF5Q8WWW0 418 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 LZICQ8WZA0 190 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 STMN2Q93045 179 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 SLC35G5Q96KT7 338 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 MS4A4EQ96PG1 132 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 OR2V2Q96R30 315 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 ZNF607Q96SK3 696 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 CLEC7AQ9BXN2 247 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 OR11A1Q9GZK7 315 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 GLIPR2Q9H4G4 154 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 YY1AP1Q9H869 796 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 RETNQ9HD89 108 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 ZCCHC3Q9NUD5 404 aaKnown RBP4.83□□□□□ -1.64
CCDC60-203ENST00000536742 ONECUT1Q9UBC0 465 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 ANGPT4Q9Y264 503 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 SELENOKQ9Y6D0 94 aa4.83□□□□□ -1.64
CCDC60-203ENST00000536742 TRAV34A0A0B4J273 112 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 A6NDX4 124 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 ENTPD5O75356 428 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 HSD17B1P14061 328 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 GPX2P18283 190 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 ATP6V1C1P21283 382 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 IFNA8P32881 189 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 MPV17P39210 176 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 MAP3K8P41279 467 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 HTR5AP47898 357 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 TCTAP57738 103 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 DSTNP60981 165 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 NCALDP61601 193 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 LIPEQ05469 1076 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 SCARB2Q14108 478 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 FLOT2Q14254 428 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 FGD3Q5JSP0 725 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 ZC2HC1BQ5TFG8 222 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 C10orf99Q6UWK7 81 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 TMEM107Q6UX40 140 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 DLEU7Q6UYE1 221 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 C16orf62Q7Z3J2 963 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 GRINAQ7Z429 371 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 NET1Q7Z628 596 aaPredicted RBP4.82□□□□□ -1.64
CCDC60-203ENST00000536742 DHFR2Q86XF0 187 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 ZNF645Q8N7E2 425 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 CDRT4Q8N9R6 151 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 OR10A6Q8NH74 314 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 PSMA8Q8TAA3 256 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 RPS4Y2Q8TD47 263 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 KLF14Q8TD94 323 aaPredicted RBP4.82□□□□□ -1.64
CCDC60-203ENST00000536742 C17orf50Q8WW18 174 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 IKZF5Q9H5V7 419 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 ABCB10Q9NRK6 738 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 GIN1Q9NXP7 522 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 VNN3Q9NY84 501 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 P2RX2Q9UBL9 471 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 CACNG5Q9UF02 275 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 EXOGQ9Y2C4 368 aaKnown RBP4.82□□□□□ -1.64
CCDC60-203ENST00000536742 POFUT2Q9Y2G5 429 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 GMEB1Q9Y692 573 aa4.82□□□□□ -1.64
CCDC60-203ENST00000536742 A0A1W2PRQ8 180 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms