RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 OR10Z1Q8NGY1 313 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 MOB3AQ96BX8 217 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 MARS2Q96GW9 593 aaKnown RBP13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 C18orf12Q96KH6 178 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 C1QTNF5Q9BXJ0 243 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 ARV1Q9H2C2 271 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PRELID3BQ9Y3B1 194 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 NCKAP5O14513 1909 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 HEXAP06865 529 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 MMP7P09237 267 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 FXYD4P59646 89 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 SSPNQ14714 243 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 LYZL2Q7Z4W2 148 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM212BQ9NTI7 297 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PLA2G2EQ9NZK7 142 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF205O95201 554 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 SCGB1D2O95969 90 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 DUSP1P28562 367 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 DVL1P1P54792 670 aaPredicted RBP13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 GFRA1P56159 465 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 RBM11P57052 281 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 SWI5Q1ZZU3 235 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM76BQ5HYJ3 339 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 CBLN2Q8IUK8 224 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 LGI3Q8N145 548 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 Q8NFD4 153 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 DYRK2Q92630 601 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 MSI2Q96DH6 328 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 DEPPQ9NTK1 212 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 MLXQ9UH92 298 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 DMDP11532 3685 aa13.86□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM221AA4D161 298 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 LINC01387J3KSC0 135 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 F12P00748 615 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 GLP1RP43220 463 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 NPBWR1P48145 328 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 RPS18P62269 152 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 PHLDA2Q53GA4 152 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 ESX1Q8N693 406 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 TMEM45BQ96B21 275 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 RSRP1Q9BUV0 290 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 STARD10Q9Y365 291 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 SERPINA7P05543 415 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 SFTA3P0C7M3 94 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 SEC11BP0C7V7 166 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 GDF1P27539 372 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 IL13RA2Q14627 380 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 TRIM61Q5EBN2 209 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 COLCA1Q6ZS62 124 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 RAB11FIP2Q7L804 512 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 CCDC71LQ8N9Z2 235 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 NAXEQ8NCW5 288 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 ABHD3Q8WU67 409 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 SMIM3Q9BZL3 60 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF442Q9H7R0 627 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 PARPBPQ9NWS1 579 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 ATPIF1Q9UII2 106 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 TMED3Q9Y3Q3 217 aa13.85□□□□□ -0.19
CHMP1A-202ENST00000535997 BORCS7-ASMTA0A0B4J1R7 106 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 EDN3P14138 238 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 P2RY1P47900 373 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 TSPO2Q5TGU0 170 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 Q6ZRG5 221 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 CALHM1Q8IU99 346 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF611Q8N823 705 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 CPEB3Q8NE35 698 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A10PA6NDY2 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A18PA6NE21 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A16PA6NEW6 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A20PA6NIJ5 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A8PA6NJQ4 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A7PA6NKC0 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A22PA8MWA6 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A12PA8MX19 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A5PA8MXJ8 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A23PA8MXZ1 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF587BE7ETH6 402 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 ST8SIA3O43173 380 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 GPR137BO60478 399 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A15PP0C7V4 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A13PP0C7W8 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A14PP0C7W9 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM90A24PP0C7X0 464 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 CD80P33681 288 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FOXO1Q12778 655 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 C6orf15Q6UXA7 325 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 OR5L1Q8NGL2 311 aa13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 FBXO9Q9UK97 447 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-202ENST00000535997 TNRC18O15417 2968 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 IGKV3D-15A0A087WSY6 115 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 PRSS44E7EML9 344 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 AGPAT2O15120 278 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 MRPL33O75394 65 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 OR7C1O76099 320 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms