RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 OR10R2Q8NGX6 335 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 GCDHQ92947 438 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ALX4Q9H161 411 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 TLNRD1Q9H1K6 362 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 GPN1Q9HCN4 374 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 OBP2BQ9NPH6 170 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 DECR2Q9NUI1 292 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 IGKV1-12A0A0C4DH73 117 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 GFRA3O60609 400 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 IGKV1D-12P01611 117 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 CHRM2P08172 466 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 GSTP1P09211 210 aaKnown RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF20P17024 532 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ESPL1Q14674 2120 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 PEA15Q15121 130 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 PPA1Q15181 289 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 TAF13Q15543 124 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF660Q6AZW8 331 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 Q6ZS49 121 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM200AQ86VY9 491 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 NAXEQ8NCW5 288 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 FAM57AQ8TBR7 257 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 APOBEC3DQ96AK3 386 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 RHOFQ9HBH0 211 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 CA10Q9NS85 328 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 TAS2R8Q9NYW2 309 aa6.87□□□□□ -1.31
COL21A1-212ENST00000535941 MRPS28Q9Y2Q9 187 aaKnown RBP6.87□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF816-ZNF321PA0A0X1KG74 233 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 F5H5K5 113 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 RAD51DO75771 328 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FARS2O95363 451 aaKnown RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 IL5P05113 134 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TUBG1P23258 451 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 VAMP1P23763 118 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 SRSF4Q08170 494 aaKnown RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 AARDQ4LEZ3 155 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 Q6ZPA2 131 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 KCNG3Q8TAE7 436 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 NKX3-1Q99801 234 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 NICN1Q9BSH3 213 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 PIGMQ9H3S5 423 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TUBG2Q9NRH3 451 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 RCC2Q9P258 522 aaKnown RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 MUC6Q6W4X9 2439 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 A0A1B0GUH1 482 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM218A2RU14 115 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 DCDC2BA2VCK2 349 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A10PA6NDY2 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A18PA6NE21 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A16PA6NEW6 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A20PA6NIJ5 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A8PA6NJQ4 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A7PA6NKC0 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A22PA8MWA6 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A12PA8MX19 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A5PA8MXJ8 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A23PA8MXZ1 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 SMPD2O60906 423 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 PTBP3O95758 552 aaKnown RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A15PP0C7V4 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A13PP0C7W8 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A14PP0C7W9 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM90A24PP0C7X0 464 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 PTHLHP12272 177 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 CALCRP30988 508 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 GUCA1AP43080 201 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FOXF2Q12947 444 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 GLIPR1L1Q6UWM5 242 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 ANGPTL5Q86XS5 388 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 OR51T1Q8NGJ9 327 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 OR2AE1Q8NHA4 323 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 FAM71F1Q96KD3 344 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 ASF1BQ9NVP2 202 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 RAI1Q7Z5J4 1906 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 H3BSH0 61 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 KLK10O43240 276 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 HIST1H1DP16402 221 aaKnown RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TBPP20226 339 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 AP3S2P59780 193 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 GUCA2AQ02747 115 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 DHRS7BQ6IAN0 325 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 VWA1Q6PCB0 445 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 MDP1Q86V88 176 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
COL21A1-212ENST00000535941 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 CYYR1Q96J86 154 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 TREM2Q9NZC2 230 aa6.86□□□□□ -1.31
COL21A1-212ENST00000535941 SLC31A2O15432 143 aa6.85□□□□□ -1.31
COL21A1-212ENST00000535941 HLA-HP01893 362 aa6.85□□□□□ -1.31
COL21A1-212ENST00000535941 CRYABP02511 175 aaKnown RBP6.85□□□□□ -1.31
COL21A1-212ENST00000535941 PSMB1P20618 241 aaKnown RBP6.85□□□□□ -1.31
COL21A1-212ENST00000535941 RAD52P43351 418 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms