RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MOGAT1Q96PD6 335 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEFF2Q9UIK5 374 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 A0A1B0GTQ1 180 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 AGFG2O95081 481 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF768Q9H5H4 540 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 HEXA-AS1Q9H8Q6 139 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 MTFP1Q9UDX5 166 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 SPAARA0A1B0GVQ0 90 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 SPINK4O60575 86 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 NEURL1O76050 574 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 KIAA0040Q15053 153 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 CLPPQ16740 277 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 GGNBP1Q5YKI7 109 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEM88Q6PEY1 159 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF547Q8IVP9 402 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 OR1L1Q8NH94 360 aa16.08■□□□□ 0.16
SFSWAP-203ENST00000535236 FAM24AA6NFZ4 105 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 SCAND1P57086 179 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 LIAT1Q6ZQX7 453 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 GTF2H5Q6ZYL4 71 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 OR8B12Q8NGG6 310 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 RNF7Q9UBF6 113 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 OOEPA6NGQ2 149 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 EML2O95834 649 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 NHLH1Q02575 133 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 NHLH2Q02577 135 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 ATP6V1FQ16864 119 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 ASCL5Q7RTU5 278 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 CCDC190Q86UF4 302 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 HMGCLL1Q8TB92 370 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 MAP6Q96JE9 813 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 CA10Q9NS85 328 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 EVPLQ92817 2033 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 A0A1W2PQD3 144 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 OR5AC1P0C628 307 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 DCAF16Q9NXF7 216 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 TRAPPC4Q9Y296 219 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 SFTPCP11686 197 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 GALR1P47211 349 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEM97Q5BJF2 176 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 PRSS42Q7Z5A4 293 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 RNF2Q99496 336 aa16.07■□□□□ 0.16
SFSWAP-203ENST00000535236 C9orf170A2RU37 121 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR2T8A6NH00 312 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 GNG7O60262 68 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 HNRNPA3P51991 378 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 LSM11P83369 360 aaKnown RBP eCLIP16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 TMEM241Q24JQ0 296 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 C1orf53Q5VUE5 145 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 ZBTB44Q8NCP5 570 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF737O75373 536 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 HAND1O96004 215 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 PRSS12P56730 875 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR10G4Q8NGN3 311 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR10G9Q8NGN4 311 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR10G7Q8NGN6 311 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 R3HDM4Q96D70 268 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 VSTM2LQ96N03 204 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 NTMQ9P121 344 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 WSB1Q9Y6I7 421 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 CNTRLQ7Z7A1 2325 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 DHRS2Q13268 280 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 IL13RA2Q14627 380 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 D2HGDHQ8N465 521 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR4D10Q8NGI6 311 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 VPS25Q9BRG1 176 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 ABHD14AQ9BUJ0 271 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 OR5AL1P0C617 328 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 RPL7P18124 248 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 RAB32Q13637 225 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 RPEL1Q2QD12 228 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 MOGAT2Q3SYC2 334 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 RBM14Q96PK6 669 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 GPR27Q9NS67 375 aa16.06■□□□□ 0.16
SFSWAP-203ENST00000535236 CST2P09228 141 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 SLC6A1P30531 599 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 FAM219BQ5XKK7 198 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF770Q6IQ21 691 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 UFC1Q9Y3C8 167 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 LIPT2A6NK58 231 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 PDPNQ86YL7 162 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 INSL4Q14641 139 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 AANATQ16613 207 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 OR2C3Q8N628 320 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF665Q9H7R5 613 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 TRDCB7Z8K6 153 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 UBE2L3P68036 154 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 HOXA4Q00056 320 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 VAMP8Q9BV40 100 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 SEMA7AO75326 666 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 SPNP16150 400 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 UQCC3Q6UW78 93 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 THSD4Q6ZMP0 1018 aa16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 RBPMS2Q6ZRY4 209 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-203ENST00000535236 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms