RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ZNF737O75373 536 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 NXPH2O95156 264 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 IGLV1-51P01701 117 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 KITP10721 976 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 IFNA8P32881 189 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 SLC18A1P54219 525 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 STX1BP61266 288 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 STX3Q13277 289 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 RBM39Q14498 530 aaKnown RBP4.93□□□□□ -1.62
CD44-237ENST00000534082 TRAM2Q15035 370 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 ZNF730Q6ZMV8 503 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 LINC00322Q6ZN03 302 aaPredicted RBP4.93□□□□□ -1.62
CD44-237ENST00000534082 DPY19L2P2Q6ZN68 376 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 MBOAT2Q6ZWT7 520 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 FUNDC1Q8IVP5 155 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 IFT20Q8IY31 132 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 TIGD4Q8IY51 512 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 OFCC1Q8IZS5 231 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 OR8H2Q8N162 312 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 BATF2Q8N1L9 274 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 TPRX1Q8N7U7 411 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 ZNF491Q8N8L2 437 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 TRMT10AQ8TBZ6 339 aaKnown RBP4.93□□□□□ -1.62
CD44-237ENST00000534082 TOMM40LQ969M1 308 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 RPEQ96AT9 228 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 DHRS1Q96LJ7 313 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 C20orf173Q96LM9 149 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 HIST1H2AAQ96QV6 131 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 PARD6BQ9BYG5 372 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 ALX4Q9H161 411 aaPredicted RBP4.93□□□□□ -1.62
CD44-237ENST00000534082 ABCG5Q9H222 651 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 OR51J1Q9H342 316 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 RABEP2Q9H5N1 569 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 ZNF286AQ9HBT8 521 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 PCDHB16Q9NRJ7 776 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 SIGLEC8Q9NYZ4 499 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 DNAJC27Q9NZQ0 273 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 DNAJB9Q9UBS3 223 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 STUB1Q9UNE7 303 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 RABL2BQ9UNT1 228 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 SIGLEC7Q9Y286 467 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 A0A1W2PPI3 338 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TVP23AA6NH52 213 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 OR5B21A6NL26 309 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 LINC01619G3V211 115 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TOR1AO14656 332 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 IGKV1D-33P01593 117 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 IGKV1-33P01594 117 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 CDK2P24941 298 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 FASP25445 335 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 HSD11B1P28845 292 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 CD34P28906 385 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 YAP1P46937 504 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 GTF2A1P52655 376 aaPredicted RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 ZNF121P58317 390 aaPredicted RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 FXYD6P3P58550 94 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 ZP1P60852 638 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 GRB2P62993 217 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 EWSR1Q01844 656 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-237ENST00000534082 KIAA0141Q14154 515 aaPredicted RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 WHAMMP3Q1A5X7 153 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 FGD3Q5JSP0 725 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 OR52W1Q6IF63 320 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TBPL2Q6SJ96 375 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 DLEU7Q6UYE1 221 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 PRSS45Q7RTY3 260 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TRAPPC6BQ86SZ2 158 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 ZNF575Q86XF7 245 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TGIF2LXQ8IUE1 241 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 RNF113BQ8IZP6 322 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 MAPKAPK5-AS1Q8N8E1 139 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 OR4K13Q8NH42 304 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 ZBTB9Q96C00 473 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 PGAM5Q96HS1 289 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 RSRC1Q96IZ7 334 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 KCTD7Q96MP8 289 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 ERMAPQ96PL5 475 aaPredicted RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 THAP7Q9BT49 309 aaPredicted RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 FNDC11Q9BVV2 318 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 KLK15Q9H2R5 256 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 RGCCQ9H4X1 137 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 KAT8Q9H7Z6 458 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 VIPAS39Q9H9C1 493 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 PLEKHA3Q9HB20 300 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 LIN7CQ9NUP9 197 aaKnown RBP4.92□□□□□ -1.62
CD44-237ENST00000534082 CCDC167Q9P0B6 97 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 ZNF319Q9P2F9 582 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 LGALS13Q9UHV8 139 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 TMEM5Q9Y2B1 443 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 COMMD3-BMI1R4GMX3 469 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 DSCAML1Q8TD84 2053 aa4.92□□□□□ -1.62
CD44-237ENST00000534082 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 A0A087WW49 117 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 NCBP2LA6PVI3 153 aaKnown RBP4.91□□□□□ -1.62
CD44-237ENST00000534082 J3KTA2 159 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 J3QT63 122 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms