RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 OSR2Q8N2R0 312 aa13□□□□□ -0.33
CTTN-215ENST00000533931 ZNF561Q8N587 486 aa13□□□□□ -0.33
CTTN-215ENST00000533931 KCNG3Q8TAE7 436 aa13□□□□□ -0.33
CTTN-215ENST00000533931 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
CTTN-215ENST00000533931 POLR3KQ9Y2Y1 108 aaPredicted RBP13□□□□□ -0.33
CTTN-215ENST00000533931 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 H7C1Q1 480 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 ZNF701M0R085 212 aaPredicted RBP12.99□□□□□ -0.33
CTTN-215ENST00000533931 SH2D1BO14796 132 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 TMPRSS2O15393 492 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 ADAM20O43506 726 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 NOL3O60936 208 aaKnown RBP12.99□□□□□ -0.33
CTTN-215ENST00000533931 HTR3BO95264 441 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 ARSBP15848 533 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 AMY2BP19961 511 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 LMO1P25800 156 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 PITPNBP48739 271 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 OR10A3P58181 314 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
CTTN-215ENST00000533931 BLMHQ13867 455 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 SLC22A6Q4U2R8 563 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 SFXN4Q6P4A7 337 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 USP43Q70EL4 1123 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 NR2C2APQ86WQ0 139 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
CTTN-215ENST00000533931 C19orf18Q8NEA5 215 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 PTX4Q96A99 478 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 SEH1LQ96EE3 360 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 DMRTB1Q96MA1 342 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 GAFA1Q96PS6 74 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
CTTN-215ENST00000533931 PPIAL4CA0A0B4J2A2 164 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 TMEM14DPA8MWL7 114 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 B4DSR2 109 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 FOXH1O75593 365 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 HAND1O96004 215 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 CALCBP10092 127 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 MGMTP16455 207 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 SERPINA2P20848 420 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 RBMXP38159 391 aaKnown RBP12.98□□□□□ -0.33
CTTN-215ENST00000533931 CAV3P56539 151 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 RBM11P57052 281 aaKnown RBP12.98□□□□□ -0.33
CTTN-215ENST00000533931 GMFBP60983 142 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 NCS1P62166 190 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 QRFPP83859 136 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 DYNC1I2Q13409 638 aaKnown RBP12.98□□□□□ -0.33
CTTN-215ENST00000533931 LRRC10Q5BKY1 277 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 LYPD2Q6UXB3 125 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 CD177Q8N6Q3 437 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 FAM3DQ96BQ1 224 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 CCL13Q99616 98 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 SPACA1Q9HBV2 294 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 CTSZQ9UBR2 303 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 CLN8Q9UBY8 286 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
CTTN-215ENST00000533931 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
CTTN-215ENST00000533931 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 NDUFB3O43676 98 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 ZNF737O75373 536 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 ECDO95905 644 aaPredicted RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 RAB6AP20340 208 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 KCNJ3P48549 501 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 SERPINB10P48595 397 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 VBP1P61758 197 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 CD276Q5ZPR3 534 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 OR5T2Q8NGG2 359 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 PPP1R35Q8TAP8 253 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 SLC25A46Q96AG3 418 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 KCTD12Q96CX2 325 aaKnown RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 Q96M66 194 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 TM2D1Q9BX74 207 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 NAA50Q9GZZ1 169 aaKnown RBP12.97□□□□□ -0.33
CTTN-215ENST00000533931 NARFLQ9H6Q4 476 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 NDUFA13Q9P0J0 144 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 MAB21L2Q9Y586 359 aa12.97□□□□□ -0.33
CTTN-215ENST00000533931 K7N7A8 449 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.33
CTTN-215ENST00000533931 CSN2P05814 226 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 GLAP06280 429 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 CD99P14209 185 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 RPS19P39019 145 aaKnown RBP12.96□□□□□ -0.33
CTTN-215ENST00000533931 GABRA2P47869 451 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 GNB2P62879 340 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 RPS27AP62979 156 aaKnown RBP12.96□□□□□ -0.33
CTTN-215ENST00000533931 PAX5Q02548 391 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 MXD1Q05195 221 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 HES5Q5TA89 166 aa12.96□□□□□ -0.33
CTTN-215ENST00000533931 WDR25Q64LD2 544 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms