RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TBPL2Q6SJ96 375 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 PRSS45Q7RTY3 260 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 OR8H3Q8N146 312 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 Q8N402 240 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 TMEM217Q8N7C4 229 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 PGAM5Q96HS1 289 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 ERMAPQ96PL5 475 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-215ENST00000533818 MNTQ99583 582 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 WFDC10AQ9H1F0 79 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 HES4Q9HCC6 221 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 SLC2A8Q9NY64 477 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 OR6C3Q9NZP0 311 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 RHCGQ9UBD6 479 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 SIGLEC7Q9Y286 467 aa7.96□□□□□ -1.14
CSDE1-215ENST00000533818 AMMECR1Q9Y4X0 333 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-215ENST00000533818 A0A087WUU8 490 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 FAM90A10PA6NDY2 464 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TVP23AA6NH52 213 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TRPC5OSA6NMA1 111 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 OR11H12B2RN74 326 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 ZNF878C9JN71 531 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 UBDO15205 165 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 APOC1P02654 83 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 IFNA4P05014 189 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 CD7P09564 240 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 PSKH1P11801 424 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 PEX2P28328 305 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 GRB2P62993 217 aaKnown RBP7.95□□□□□ -1.14
CSDE1-215ENST00000533818 MADCAM1Q13477 382 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TRIM25Q14258 630 aaKnown RBP7.95□□□□□ -1.14
CSDE1-215ENST00000533818 GALEQ14376 348 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 KPNB1Q14974 876 aaKnown RBP7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TRAM2Q15035 370 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 GRK1Q15835 563 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TMEM177Q53S58 311 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 UTF1Q5T230 341 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 MBOAT2Q6ZWT7 520 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 MOB3CQ70IA8 216 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 WFDC3Q8IUB2 231 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 MREGQ8N565 214 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 Q8N6K4 173 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 OR4K13Q8NH42 304 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 OR9G1Q8NH87 305 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 PRRC1Q96M27 445 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 S1PR3Q99500 378 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 FNDC11Q9BVV2 318 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TXLNGYQ9BZA5 131 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 CHST6Q9GZX3 395 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 FN3KQ9H479 309 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 PLSCR3Q9NRY6 295 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 DNAJC27Q9NZQ0 273 aa7.95□□□□□ -1.14
CSDE1-215ENST00000533818 MRM2Q9UI43 246 aaKnown RBP7.95□□□□□ -1.14
CSDE1-215ENST00000533818 TRGV10A0A0A0MS01 117 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 IGHV3-72A0A0B4J1Y9 119 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 TLDC2A0PJX2 215 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 J3QT63 122 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 M0R2N4 97 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 DLGAP1O14490 977 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 GABRR1P24046 479 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 PYCR1P32322 319 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 BMI1P35226 326 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 HAAOP46952 286 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 NPBWR2P48146 333 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 RAB40BQ12829 278 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 IL34Q6ZMJ4 242 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 RRM2BQ7LG56 351 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 MOB3BQ86TA1 216 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 OR52N4Q8NGI2 321 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 OR4D6Q8NGJ1 314 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 OR2T10Q8NGZ9 312 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 C2CD4CQ8TF44 421 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 THAP1Q9NVV9 213 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 SLC7A11Q9UPY5 501 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 POLDIP2Q9Y2S7 368 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 COMMD3-BMI1R4GMX3 469 aa7.94□□□□□ -1.14
CSDE1-215ENST00000533818 DSCAML1Q8TD84 2053 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
CSDE1-215ENST00000533818 A0A087X0M5 115 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 A0A1B0GX30 115 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 MSGN1A6NI15 193 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 IGHV3-11P01762 117 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 IGHA1P01876 353 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 HIST1H1CP16403 213 aaKnown RBP7.93□□□□□ -1.14
CSDE1-215ENST00000533818 NFYBP25208 207 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 CASQ1P31415 396 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 YAP1P46937 504 aaKnown RBP7.93□□□□□ -1.14
CSDE1-215ENST00000533818 SLC18A1P54219 525 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 P2RX3P56373 397 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 CKAP4Q07065 602 aaKnown RBP7.93□□□□□ -1.14
CSDE1-215ENST00000533818 STX3Q13277 289 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 ZNF573Q86YE8 665 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 FAM81AQ8TBF8 368 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 TSPEARQ8WU66 669 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 SPDL1Q96EA4 605 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 SLC25A19Q9HC21 320 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 TAS2R3Q9NYW6 316 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 ZNF107Q9UII5 783 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-215ENST00000533818 COPS3Q9UNS2 423 aa7.93□□□□□ -1.14
CSDE1-215ENST00000533818 TMEM5Q9Y2B1 443 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms