RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 F8VVB4 439 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 F8VWA3 439 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SRSF10O75494 262 aaKnown RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 NKX6-1P78426 367 aaPredicted RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 PLGLB1Q02325 96 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SURF2Q15527 256 aaPredicted RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 LCN15Q6UWW0 184 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 WDR5BQ86VZ2 330 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 OR52M1Q8NGK5 317 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 OR5C1Q8NGR4 320 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SNIP1Q8TAD8 396 aaKnown RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 TCEAL7Q9BRU2 100 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 GNG13Q9P2W3 67 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 C2orf16Q68DN1 1984 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 NAT2P11245 290 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 LSM6P62312 80 aaKnown RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 C15orf54Q8N8G6 183 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 OR6S1Q8NH40 331 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SLC39A7Q92504 469 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 PHF7Q9BWX1 381 aaPredicted RBP9.9□□□□□ -0.82
NXF1-211ENST00000531709 SUCNR1Q9BXA5 334 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SHANK1Q9Y566 2161 aa9.9□□□□□ -0.82
NXF1-211ENST00000531709 SLC34A2O95436 690 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 EDN3P14138 238 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 AADACP22760 399 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 SULT1A1P50225 295 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 QRFPP83859 136 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 WIPI1Q5MNZ9 446 aaPredicted RBP9.9□□□□□ -0.83
NXF1-211ENST00000531709 VASH2Q86V25 355 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 OR2C3Q8N628 320 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 PSMF1Q92530 271 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.83
NXF1-211ENST00000531709 TIMM10BQ9Y5J6 103 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 CEP250Q9BV73 2442 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 DNAJC13O75165 2243 aa9.9□□□□□ -0.83
NXF1-211ENST00000531709 ADAM20O43506 726 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 S100A8P05109 93 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 LHFPL2Q6ZUX7 228 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 THNSL2Q86YJ6 484 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
NXF1-211ENST00000531709 CCDC187A0A096LP49 1063 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 NKX2-6A6NCS4 301 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 PCBD1P61457 104 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 C17orf78Q8N4C9 275 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 ZNF611Q8N823 705 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 FOXB1Q99853 325 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 WNT16Q9UBV4 365 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 GVINP1Q7Z2Y8 2422 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 C3orf85A0A1B0GTC6 90 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 C5orf49A4QMS7 147 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 FUT3P21217 361 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 S100PP25815 95 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 FKBP2P26885 142 aaKnown RBP9.89□□□□□ -0.83
NXF1-211ENST00000531709 GPM6AP51674 278 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 WDR74Q6RFH5 385 aaPredicted RBP9.89□□□□□ -0.83
NXF1-211ENST00000531709 ZNF100Q8IYN0 542 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 ZNF441Q8N8Z8 693 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 EXTL1Q92935 676 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 ESRP2Q9H6T0 727 aaKnown RBP9.89□□□□□ -0.83
NXF1-211ENST00000531709 LIPGQ9Y5X9 500 aa9.89□□□□□ -0.83
NXF1-211ENST00000531709 A0A1W2PNV4 684 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 CD300LBA8K4G0 201 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 FCGR3AP08637 254 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 FAM157CP0CG43 387 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 RAB5AP20339 215 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 PPP1CCP36873 323 aaKnown RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 RAB5CP51148 216 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 CLEC12BQ2HXU8 276 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 IGSF11Q5DX21 431 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 A0A0J9YW62 118 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 E9PLN8 166 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 PRF1P14222 555 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 BSCL2Q96G97 398 aaPredicted RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 RARRES2Q99969 163 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 MIOXQ9UGB7 285 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 STRAPQ9Y3F4 350 aaKnown RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 TPRP12270 2363 aaKnown RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 IAPPP10997 89 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 FOSL2P15408 326 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 ALDH3B1P43353 468 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 USF2Q15853 346 aaPredicted RBP9.88□□□□□ -0.83
NXF1-211ENST00000531709 PHYHD1Q5SRE7 291 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 LFNGQ8NES3 379 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 CPT1CQ8TCG5 803 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 LYZL4Q96KX0 146 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 ZNF581Q9P0T4 197 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 TRIOO75962 3097 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 CRYM-AS1A6NIL9 109 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 CYB5BO43169 146 aa9.88□□□□□ -0.83
NXF1-211ENST00000531709 PDCD6O75340 191 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms