RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SIGMAR1Q99720 223 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 GINS3Q9BRX5 216 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 CDCA4Q9BXL8 241 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 PECRQ9BY49 303 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 TBL1XR1Q9BZK7 514 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 NXF5Q9H1B4 397 aaKnown RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 REEP4Q9H6H4 257 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 NHEJ1Q9H9Q4 299 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 ADGRL4Q9HBW9 690 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 UBE2TQ9NPD8 197 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-220ENST00000531466 SSR3Q9UNL2 185 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 UFC1Q9Y3C8 167 aa2.59□□□□□ -1.99
PTPRK-220ENST00000531466 OVOS2A0A0J9YW53 1432 aa2.59□□□□□ -2
PTPRK-220ENST00000531466 PTPRTO14522 1441 aa2.59□□□□□ -2
PTPRK-220ENST00000531466 OVOS2Q6IE36 1432 aa2.59□□□□□ -2
PTPRK-220ENST00000531466 ARHGAP35Q9NRY4 1499 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 MAP3K1Q13233 1512 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 NSG1A0A0A6YYJ2 146 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 BORCS7-ASMTA0A0B4J1R7 106 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 C20orf202A1L168 122 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TRAPPC13A5PLN9 417 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 GMNCA6NCL1 334 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR5H14A6NHG9 310 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ZFP92A6NM28 416 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 HACD1B0YJ81 288 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ZNF878C9JN71 531 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 E7EQ34 232 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 H0YL77 283 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TMX2-CTNND1H3BSU7 103 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 K7EN84 100 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 M0R143 59 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 MANBAO00462 879 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 PLPP1O14494 284 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ENSAO43768 121 aaKnown RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 MPZL2O60487 215 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SLC22A5O76082 557 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 IGF2P01344 180 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 APOA2P02652 100 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 LIMS3P0CW19 117 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 LIMS4P0CW20 117 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 LIPCP11150 499 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 MUC1P15941 1255 aaPredicted RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 USF1P22415 310 aaPredicted RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 HTR1DP28221 377 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 GCAP28676 217 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 NSG1P42857 185 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SLC25A1P53007 311 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TCL1AP56279 114 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 RIPPLY3P57055 190 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 LINC00315P59091 139 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TAS2R31P59538 309 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TPI1P60174 286 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 CKS1BP61024 79 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 PAFAH1B2P68402 229 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 HIST1H3AP68431 136 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ARG2P78540 354 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 CXCL6P80162 114 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 H3F3AP84243 136 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 FASTKQ14296 549 aaKnown RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 GINS1Q14691 196 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 QPRTQ15274 297 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 RSU1Q15404 277 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 DMRTC1Q5HYR2 192 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TMEM69Q5SWH9 247 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 WDR25Q64LD2 544 aaPredicted RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 LINC00299Q6ZSB3 139 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 HIST2H3AQ71DI3 136 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 COMMD7Q86VX2 200 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 RAB43Q86YS6 212 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SLC22A18ASQ8N1D0 253 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SMIM20Q8N5G0 67 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 C12orf45Q8N5I9 185 aaPredicted RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 OR4E2Q8NGC2 313 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR13C4Q8NGS5 318 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR6N1Q8NGY5 312 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 RDH11Q8TC12 318 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 TCTEX1D2Q8WW35 142 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ASB13Q8WXK3 278 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 MRPS31Q92665 395 aaKnown RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 CMTM7Q96FZ5 175 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 PCED1BQ96HM7 432 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 CAPNS2Q96L46 248 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR7D2Q96RA2 312 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SULT4A1Q9BR01 284 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 UGT2B28Q9BY64 529 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 RPF2Q9H7B2 306 aaKnown RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 LRTM1Q9HBL6 345 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 WFDC1Q9HC57 220 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 GDF3Q9NR23 364 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 DCAF13Q9NV06 445 aaKnown RBP2.58□□□□□ -2
PTPRK-220ENST00000531466 FAM206AQ9NX38 181 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 MED29Q9NX70 200 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 DOK5Q9P104 306 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR1A1Q9P1Q5 309 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OPTCQ9UBM4 332 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 OR12D3Q9UGF7 316 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 PRO0628Q9UI54 55 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SCP2D1Q9UJQ7 156 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 JPT1Q9UK76 154 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 ING4Q9UNL4 249 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms