RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 RTN4RL2Q86UN3 420 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 OR8H2Q8N162 312 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 ABHD12Q8N2K0 398 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 TPRX1Q8N7U7 411 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 OR51L1Q8NGJ5 315 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 OR56B4Q8NH76 319 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 MYOZ3Q8TDC0 251 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 TLCD1Q96CP7 247 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 HIST1H2AAQ96QV6 131 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 CCDC28BQ9BUN5 200 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 IFT27Q9BW83 186 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 VIPAS39Q9H9C1 493 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 GNB4Q9HAV0 340 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 HES4Q9HCC6 221 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 SLC22A13Q9Y226 551 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 ARRDC5A6NEK1 342 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 OOSP1A8MZH6 123 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 DEDDO75618 318 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 SERPINA1P01009 418 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 APOC1P02654 83 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 FAM106CPP0CH98 169 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 KDELR2P33947 212 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 CEACAM3P40198 252 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 GPR12P47775 334 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 ESRRGP62508 458 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 GNB1P62873 340 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
CD44-232ENST00000531118 CFHR3Q02985 330 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 CEACAM21Q3KPI0 293 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 IFI44LQ53G44 452 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 PLCXD3Q63HM9 321 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 HAPLN4Q86UW8 402 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 CATSPERDQ86XM0 798 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 OR8J3Q8NGG0 315 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 OR2T4Q8NH00 348 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 FAM81AQ8TBF8 368 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 RNF133Q8WVZ7 376 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 DYDC1Q8WWB3 177 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 DCUN1D4Q92564 292 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 TOMM40LQ969M1 308 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 EME1Q96AY2 570 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 ZBTB9Q96C00 473 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 ATP6V1G3Q96LB4 118 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 ZNF286AQ9HBT8 521 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 CD300AQ9UGN4 299 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 POLDIP2Q9Y2S7 368 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 X6R8D5 127 aa6.35□□□□□ -1.39
CD44-232ENST00000531118 TRBV4-1A0A0J9YWV2 114 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 A0A1W2PPI3 338 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 A0A1W2PRQ8 180 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 HMGB1P1B2RPK0 211 aaPredicted RBP6.34□□□□□ -1.39
CD44-232ENST00000531118 LY6LH3BQJ8 138 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 I3L521 148 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 HSPA12AO43301 675 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 NOS1APO75052 506 aaPredicted RBP6.34□□□□□ -1.39
CD44-232ENST00000531118 IGHG4P01861 327 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 H1F0P07305 194 aaKnown RBP6.34□□□□□ -1.39
CD44-232ENST00000531118 NAT1P18440 290 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 CD34P28906 385 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 HAAOP46952 286 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 RUNX1Q01196 453 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 DGCR6Q14129 220 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 HES1Q14469 280 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 RNLSQ5VYX0 342 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 KRT74Q7RTS7 529 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 TRAPPC6BQ86SZ2 158 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 CYP4Z1Q86W10 505 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 THNSL2Q86YJ6 484 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 FAM86B1Q8N7N1 296 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 OR8B12Q8NGG6 310 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 OR1N2Q8NGR9 330 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 TRMT10AQ8TBZ6 339 aaKnown RBP6.34□□□□□ -1.39
CD44-232ENST00000531118 ARPC1AQ92747 370 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 CREB3L1Q96BA8 519 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 AMELYQ99218 206 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 GON7Q9BXV9 100 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 RABEP2Q9H5N1 569 aa6.34□□□□□ -1.39
CD44-232ENST00000531118 ZNF593O00488 134 aaPredicted RBP6.33□□□□□ -1.4
CD44-232ENST00000531118 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
CD44-232ENST00000531118 ZNF682O95780 498 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OR8U9P0C7N5 309 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ARSBP15848 533 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 VDAC1P21796 283 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 CDK2P24941 298 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 PSMB8P28062 276 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OPRL1P41146 370 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 SLURP1P55000 103 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ERVK11-1P61568 191 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 CBX1P83916 185 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 RBM39Q14498 530 aaKnown RBP6.33□□□□□ -1.4
CD44-232ENST00000531118 TEX30Q5JUR7 227 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OR52W1Q6IF63 320 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ACSM6Q6P461 480 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 MOB3CQ70IA8 216 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 LILRB2Q8N423 598 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OR5A2Q8NGI9 324 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OR6N2Q8NGY6 317 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms