RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 MED13LQ71F56 2210 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 A0A1W2PP11 408 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 TMPRSS2O15393 492 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 ADAM20O43506 726 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 TMEM127O75204 238 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 VSIG8P0DPA2 414 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 RPS2P15880 293 aaKnown RBP14.11□□□□□ -0.15
SF3B2-211ENST00000531041 GABRA2P47869 451 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 CAPZA1P52907 286 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 CLDN12P56749 244 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 QRFPP83859 136 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 P2RY14Q15391 338 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 USP43Q70EL4 1123 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 NLRC3Q7RTR2 1065 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 CROCCP3Q8IVE0 287 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 CD177Q8N6Q3 437 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 TMEM104Q8NE00 496 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 OR51D1Q8NGF3 324 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 KCNG3Q8TAE7 436 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 FAM3DQ96BQ1 224 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 MED30Q96HR3 178 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 CCL13Q99616 98 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 OR14J1Q9UGF5 321 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 GLS2Q9UI32 602 aa14.11□□□□□ -0.15
SF3B2-211ENST00000531041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.11□□□□□ -0.151e-6■■■■■ 31.5
SF3B2-211ENST00000531041 CELSR1Q9NYQ6 3014 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 MALRD1Q5VYJ5 2156 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 NKX6-3A6NJ46 265 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 TMEM14DPA8MWL7 114 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 H7C1Q1 480 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 SH2D1BO14796 132 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 SIGLEC5O15389 551 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 MGMTP16455 207 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 DUSP1P28562 367 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 IL2RGP31785 369 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 CEBPDP49716 269 aaPredicted RBP14.1□□□□□ -0.15
SF3B2-211ENST00000531041 RBM11P57052 281 aaKnown RBP14.1□□□□□ -0.15
SF3B2-211ENST00000531041 IL13RA1P78552 427 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 IL13RA2Q14627 380 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 C2orf76Q3KRA6 126 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 OR2W3Q7Z3T1 314 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 CIARTQ8N365 385 aaPredicted RBP14.1□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF561Q8N587 486 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 ISOC1Q96CN7 298 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 GAFA1Q96PS6 74 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 RBM38Q9H0Z9 239 aaKnown RBP14.1□□□□□ -0.15
SF3B2-211ENST00000531041 DCSTAMPQ9H295 470 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 LIN7BQ9HAP6 207 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 CTSZQ9UBR2 303 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 FBLN5Q9UBX5 448 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 DAPK2Q9UIK4 370 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 ST3GAL6Q9Y274 331 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 MAB21L2Q9Y586 359 aa14.1□□□□□ -0.15
SF3B2-211ENST00000531041 NOL3O60936 208 aaKnown RBP14.09□□□□□ -0.15
SF3B2-211ENST00000531041 CRTAPO75718 401 aaPredicted RBP14.09□□□□□ -0.15
SF3B2-211ENST00000531041 HAND1O96004 215 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 TFF1P04155 84 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 CHRM2P08172 466 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 SLC2A2P11168 524 aaPredicted RBP14.09□□□□□ -0.15
SF3B2-211ENST00000531041 LMO1P25800 156 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 SNU13P55769 128 aaKnown RBP14.09□□□□□ -0.15
SF3B2-211ENST00000531041 UNC119Q13432 240 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 PIGYQ3MUY2 71 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 OR10K2Q6IF99 312 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF841Q6ZN19 808 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 LINC00596Q86U02 117 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 MAPK1IP1LQ8NDC0 245 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 NDNFQ8TB73 568 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 SLC25A46Q96AG3 418 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 POM121Q96HA1 1249 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 C1orf159Q96HA4 380 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 BANF2Q9H503 90 aa14.09□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF469Q96JG9 3925 aaPredicted RBP14.09□□□□□ -0.15
SF3B2-211ENST00000531041 H3BMQ9 156 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 LDLRAD4O15165 306 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 PITPNBP48739 271 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 NPY4RP50391 375 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 MPV17LQ2QL34 196 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 ESCO2Q56NI9 601 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 Q6P435 159 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 FAM216BQ8N7L0 139 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 ZNRF1Q8ND25 227 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 FAM46BQ96A09 425 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 COX4I2Q96KJ9 171 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 Q96M66 194 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 MRI1Q9BV20 369 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 TMEM59Q9BXS4 323 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 KCNK15Q9H427 330 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 IFT22Q9H7X7 185 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 METRNQ9UJH8 293 aa14.08□□□□□ -0.15
SF3B2-211ENST00000531041 ZANQ9Y493 2812 aa14.08□□□□□ -0.16
SF3B2-211ENST00000531041 TMEM272A0A1B0GTI8 110 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 A0A1B0GW55 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A10PA6NDY2 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A18PA6NE21 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A16PA6NEW6 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A20PA6NIJ5 464 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms