RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CTXN2P0C2S0 81 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 RRASP10301 218 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 SELEP16581 610 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 CXCL2P19875 107 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 FUT3P21217 361 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 VAMP1P23763 118 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 GLP1RP43220 463 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 KIR2DS4P43632 304 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 UCP3P55916 312 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 RBM11P57052 281 aaKnown RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 ARPC4P59998 168 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 FGF12P61328 243 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 RAB1AP62820 205 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 EIF5AP63241 154 aaKnown RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 SRPXP78539 464 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 TAGLNQ01995 201 aaKnown RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 HGFACQ04756 655 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 SRYQ05066 204 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 HLXQ14774 488 aaPredicted RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 KIR2DS1Q14954 304 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR52W1Q6IF63 320 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 C11orf87Q6NUJ2 197 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 RPUSD3Q6P087 351 aaKnown RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 DHRS11Q6UWP2 260 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 C1QL2Q7Z5L3 287 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ZNF573Q86YE8 665 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 TUSC5Q8IXB3 177 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 Q8IYB0 196 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR8H3Q8N146 312 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 INO80EQ8NBZ0 244 aaPredicted RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR1K1Q8NGR3 316 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR51F2Q8NH61 342 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OR2AE1Q8NHA4 323 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 MARCH1Q8TCQ1 289 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 NPRL2Q8WTW4 380 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 MRGPRFQ96AM1 343 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 WDYHV1Q96HA8 205 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 POM121L2Q96KW2 1035 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 HIST1H2AAQ96QV6 131 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 NKX3-1Q99801 234 aaPredicted RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 CMSS1Q9BQ75 279 aaKnown RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 SYT3Q9BQG1 590 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 PKIBQ9C010 78 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ARL6Q9H0F7 186 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 FXYD6Q9H0Q3 95 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 DNTTIP1Q9H147 329 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 IFT22Q9H7X7 185 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 CALHM2Q9HA72 323 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ZNF286AQ9HBT8 521 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 OBP2BQ9NPH6 170 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ASCL3Q9NQ33 180 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 C1orf123Q9NWV4 160 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 PLA2G3Q9NZ20 509 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 EHFQ9NZC4 300 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 TNFSF18Q9UNG2 199 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 KCNIP3Q9Y2W7 256 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 SESN1Q9Y6P5 492 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 MED12Q93074 2177 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 PRUNE2Q8WUY3 3088 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 LOC100509620A0A075B734 347 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 TRBV6-6A0A0A6YYG2 114 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 A0A1W2PP11 408 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 RPS10-NUDT3A0A1W2PQS6 291 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C5orf49A4QMS7 147 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C5orf63A6NC05 138 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ARGFXA6NJG6 315 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ANKRD30BLA7E2S9 258 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 NUDT19A8MXV4 375 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 H7C1Q1 480 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 BCL2L11O43521 198 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CEACAM4O75871 244 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 IFNA2P01563 188 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CSN2P05814 226 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 FCGR3AP08637 254 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 OR5H8P0DN80 308 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 LYL1P12980 280 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CEACAM1P13688 526 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 AKR1C4P17516 323 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ANOS1P23352 680 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PSMB6P28072 239 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 NUP62P37198 522 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 RBMXP38159 391 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 GNG3P63215 75 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 SORDQ00796 357 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 NAAAQ02083 359 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 IL24Q13007 206 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PRDX4Q13162 271 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 IL13RA2Q14627 380 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 GABRA6Q16445 453 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 TBC1D28Q2M2D7 210 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C2orf68Q2NKX9 166 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 AADACL3Q5VUY0 350 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms