RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SPHARQ15513 63 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 METTL11BQ5VVY1 283 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 EMG1Q92979 244 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 NEK6Q9HC98 313 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 C19orf12Q9NSK7 152 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 TRAV8-7A0A075B6U6 113 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 PIN1P1O15428 100 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 HAND1O96004 215 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 CYB5AP00167 134 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 DUSP1P28562 367 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 CAPZA1P52907 286 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 ASCL4Q6XD76 172 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 C17orf107Q6ZR85 190 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 BPIFB2Q8N4F0 458 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF418Q8TF45 676 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 OR14A2Q96R54 314 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF184Q99676 751 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 SUCNR1Q9BXA5 334 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 ESM1Q9NQ30 184 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 ONECUT1Q9UBC0 465 aa13.25□□□□□ -0.29
TSPAN4-218ENST00000529566 MAGEA13PA6NCF6 341 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 GABRPO00591 440 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 DENRO43583 198 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 RGS10O43665 173 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 TMEM225BP0DP42 221 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 PRKACAP17612 351 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 FSTP19883 344 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 BPIFB3P59826 476 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 PDCD1Q15116 288 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 RBM48Q5RL73 367 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 TMEM200BQ69YZ2 307 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 ELP2Q6IA86 826 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 PRSS48Q7RTY5 328 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 VMO1Q7Z5L0 202 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 C11orf42Q8N5U0 333 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 SIGLECL1Q8N7X8 197 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 ZDHHC22Q8N966 263 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 Q8NFD4 153 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 PXT1Q8NFP0 134 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 TMEM158Q8WZ71 300 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 SNX22Q96L94 193 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 DERL3Q96Q80 235 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 NKX3-1Q99801 234 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 UNKLQ9H9P5 680 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-218ENST00000529566 IGHV1-69DA0A0B4J2H0 117 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 A0A1W2PPK0 400 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 RNF212BA8MTL3 300 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 M0R1W7 72 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 PSPNO60542 156 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 IGHV1-69P01742 117 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 LMO1P25800 156 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 BDKRB2P30411 391 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 TGFBR2P37173 567 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 GP2P55259 537 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 DLX1P56177 255 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 GPR50Q13585 617 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 INSL4Q14641 139 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 GPR157Q5UAW9 335 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 RUSC1-AS1Q66K80 236 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 Q6P435 159 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 METAP1DQ6UB28 335 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 OR4M1Q8NGD0 313 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 LHX4Q969G2 390 aa13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 C1orf147Q96MC9 270 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 MS4A7Q9GZW8 240 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-218ENST00000529566 A0A1W2PQ09 198 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 RNASEK-C17orf49H0YIS7 233 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 MAGEB3O15480 346 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 PTGFRP43088 359 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 MAP2K4P45985 399 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 OR3A4PP47883 348 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 SNU13P55769 128 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 DLX6P56179 175 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 PPP3R1P63098 170 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 PRB3Q04118 309 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 TPBGQ13641 420 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 MED22Q15528 200 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 DDI2Q5TDH0 399 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 FIP1L1Q6UN15 594 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 PHC2Q8IXK0 858 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 CMTM4Q8IZR5 234 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 FAM185AQ8N0U4 392 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 OR8H2Q8N162 312 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 TNFAIP8L1Q8WVP5 186 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 CPNE2Q96FN4 548 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 NOX4Q9NPH5 578 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms