RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 PAK1IP1Q9NWT1 392 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 SCN3BQ9NY72 215 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 ERGIC3Q9Y282 383 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 PCDHGB5Q9Y5G0 923 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 TENM1Q9UKZ4 2725 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 IGHV1-69DA0A0B4J2H0 117 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 A0A1W2PQ09 198 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 M0R1W7 72 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 IGHV1-69P01742 117 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 ALDOBP05062 364 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 CD1AP06126 327 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 HCKP08631 526 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 HSPA13P48723 471 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 SLC35A2P78381 396 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 YIF1BQ5BJH7 314 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 TMEM200BQ69YZ2 307 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 OR13C5Q8NGS8 318 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 SGCDQ92629 289 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 TNFRSF14Q92956 283 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 TAS2R4Q9NYW5 299 aa13.82□□□□□ -0.2
HIF3A-211ENST00000528563 TMEM82A0PJX8 343 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 MYL12BO14950 172 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 GPX5O75715 221 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 HAND1O96004 215 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 TMEM225BP0DP42 221 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 CALCBP10092 127 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 DUSP1P28562 367 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 RPL31P62899 125 aaKnown RBP13.81□□□□□ -0.2
HIF3A-211ENST00000528563 ACSM1Q08AH1 577 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 Q499Y3 187 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 SPIN3Q5JUX0 258 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 RUSC1-AS1Q66K80 236 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 C17orf107Q6ZR85 190 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 C11orf42Q8N5U0 333 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 OR52N4Q8NGI2 321 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 TBC1D15Q8TC07 691 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 FAM216AQ8WUB2 273 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 SNX22Q96L94 193 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 C1orf147Q96MC9 270 aaPredicted RBP13.81□□□□□ -0.2
HIF3A-211ENST00000528563 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
HIF3A-211ENST00000528563 MAGEB3O15480 346 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PRKACAP17612 351 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 IGFBP3P17936 291 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 CELP19835 753 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PRTN3P24158 256 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 BDH1Q02338 343 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 IRF3Q14653 427 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 FIP1L1Q6UN15 594 aaKnown RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 ASCL4Q6XD76 172 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 FAM185AQ8N0U4 392 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 OR8H2Q8N162 312 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PXT1Q8NFP0 134 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 OR4M1Q8NGD0 313 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 OR5D13Q8NGL4 314 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 ORAI1Q96D31 301 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 METTL8Q9H825 291 aaKnown RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 TMEM138Q9NPI0 162 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 SIRT7Q9NRC8 400 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 TRBV5-7A0A0A0MS05 114 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PNMA8CA0A1B0GUJ8 204 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 RNASEK-C17orf49H0YIS7 233 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PSPNO60542 156 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 DLX1P56177 255 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 UBA52P62987 128 aaKnown RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 BAMBIQ13145 260 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 SATL1Q86VE3 508 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PDZD9Q8IXQ8 264 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 Q8NFD4 153 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 OR5M11Q96RB7 305 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 MND1Q9BWT6 205 aa13.8□□□□□ -0.2
HIF3A-211ENST00000528563 LSM2Q9Y333 95 aaKnown RBP13.8□□□□□ -0.2
HIF3A-211ENST00000528563 MDFIC2A0A1B0GVS7 189 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 DNAJC9-AS1A6NH13 148 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 CLDN34H7C241 214 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 GABRPO00591 440 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 SH2D1BO14796 132 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 CRHBPP24387 322 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 LMO1P25800 156 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-211ENST00000528563 BLMHQ13867 455 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 SPHARQ15513 63 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
HIF3A-211ENST00000528563 OR14A2Q96R54 314 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 NOX4Q9NPH5 578 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 RAB26Q9ULW5 256 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
HIF3A-211ENST00000528563 TRAV8-7A0A075B6U6 113 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 BDKRB2P30411 391 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 TGFBR2P37173 567 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 VHLP40337 213 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 PTGFRP43088 359 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 DLX6P56179 175 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 PPP3R1P63098 170 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms