RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 PGAM2P15259 253 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 BCL3P20749 454 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 IL32P24001 234 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 TIMP3P35625 211 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 UCP3P55916 312 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 FAM76BQ5HYJ3 339 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 SLAMF9Q96A28 289 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 ELMOD3Q96FG2 381 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF2Q9BSG1 426 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 NMES1Q9C002 83 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 OR51I2Q9H344 312 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 MAB21L2Q9Y586 359 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 LRP5LA4QPB2 252 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 TMEM210A6NLX4 147 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 SDCBPO00560 298 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 CGAP01215 116 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 HTR2BP41595 481 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 GLP1RP43220 463 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 OR2T2Q6IF00 324 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 DPCDQ9BVM2 203 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 BCL2L14Q9BZR8 327 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 FGF23Q9GZV9 251 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF71Q9NQZ8 489 aaPredicted RBP12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 MTCH1Q9NZJ7 389 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 UBQLN2Q9UHD9 624 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
ECHDC1-220ENST00000528402 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 TRBV6-6A0A0A6YYG2 114 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 TNFSF13O75888 250 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 CXCL2P19875 107 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 NPBWR2P48146 333 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 RAB14P61106 215 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 CLEC18BQ6UXF7 455 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 TMUB2Q71RG4 321 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 SGPP2Q8IWX5 399 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM58AQ8N1B3 248 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 SPERTQ8NA61 448 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 EXTL1Q92935 676 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 SYT3Q9BQG1 590 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 MFFQ9GZY8 342 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 FXYD6Q9H0Q3 95 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 C1orf123Q9NWV4 160 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 GTF3C1Q12789 2109 aa12.64□□□□□ -0.39
ECHDC1-220ENST00000528402 IGKV1D-8A0A087WSZ0 117 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 KIR2DS1A0A191URI9 304 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 H7C1Q1 480 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 ARPC5O15511 151 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 RP2O75695 350 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 OR2F2O95006 317 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 IFNA2P01563 188 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 CA6P23280 308 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 GLRA1P23415 457 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 SSTR2P30874 369 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 KIR2DS4P43632 304 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 SORDQ00796 357 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 OR2F1Q13607 317 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 ZNF345Q14585 488 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 KIR2DS1Q14954 304 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 C1orf185Q5T7R7 199 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 ZNF546Q86UE3 836 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 OR1J1Q8NGS3 322 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 MAFIPQ8WZ33 124 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 TREM2Q9NZC2 230 aa12.63□□□□□ -0.39
ECHDC1-220ENST00000528402 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 NAPSAO96009 420 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 OPRM1P35372 400 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 RBMXP38159 391 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 MDH2P40926 338 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC22A25Q6T423 547 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM180AQ6UWF9 173 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 BHLHA15Q7RTS1 189 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC38A6Q8IZM9 456 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM185AQ8N0U4 392 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms