RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 A0A1W2PRM7 423 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 BTBD17A6NE02 478 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 ANGPTL7O43827 346 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 HAND1O96004 215 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 BCL3P20749 454 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 MDKP21741 143 aaPredicted RBP26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 IL18R1Q13478 541 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 ZNF273Q14593 569 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 GDPGP1Q6ZNW5 385 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 C17orf107Q6ZR85 190 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 GDPD3Q7L5L3 318 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 CYGBQ8WWM9 190 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 PDCD1LG2Q9BQ51 273 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 BEX1Q9HBH7 125 aa26.96■■□□□ 1.91
SSSCA1-205ENST00000527920 INMTO95050 263 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 CLIC3O95833 236 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 DLX6P56179 175 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 ERVFRD-1P60508 538 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 ADARB1P78563 741 aaKnown RBP26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 RELBQ01201 579 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 MEF2CQ06413 473 aaPredicted RBP26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 DHRSXQ8N5I4 330 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 BEND2Q8NDZ0 799 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 OR5R1Q8NH85 324 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 CNIH3Q8TBE1 160 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 RPS4Y2Q8TD47 263 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 TAF15Q92804 592 aaKnown RBP eCLIP26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 HMG20AQ9NP66 347 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 GLS2Q9UI32 602 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 VPREB3Q9UKI3 123 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 DHDHQ9UQ10 334 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 HSPE1-MOB4S4R3N1 261 aa26.95■■□□□ 1.9
SSSCA1-205ENST00000527920 TMEM82A0PJX8 343 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 C17orf98A8MV24 154 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 SPRY1O43609 319 aaPredicted RBP26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 SULT1B1O43704 296 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 KDM4BO94953 1096 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 CCL3L1P16619 93 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 OMGP23515 440 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 TAF9Q16594 264 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 TMPRSS11AQ6ZMR5 421 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 IL36RNQ9UBH0 155 aa26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 DIMT1Q9UNQ2 313 aaKnown RBP26.94■■□□□ 1.9
SSSCA1-205ENST00000527920 ETV1P50549 477 aa26.93■■□□□ 1.9
SSSCA1-205ENST00000527920 RPL22L1Q6P5R6 122 aaKnown RBP26.93■■□□□ 1.9
SSSCA1-205ENST00000527920 ZSCAN4Q8NAM6 433 aaPredicted RBP26.93■■□□□ 1.9
SSSCA1-205ENST00000527920 EXOSC1Q9Y3B2 195 aaKnown RBP26.93■■□□□ 1.9
SSSCA1-205ENST00000527920 IGKV1-12A0A0C4DH73 117 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 CASQ2O14958 399 aaPredicted RBP26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 IGKV1D-12P01611 117 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 ZNF728P0DKX0 622 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 PIPP12273 146 aaPredicted RBP26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 PRKACAP17612 351 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 EDDM3BP56851 147 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 CDK5R1Q15078 307 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 CRIP3Q6Q6R5 217 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 TSEN15Q8WW01 171 aaKnown RBP26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 RFT1Q96AA3 541 aa26.92■■□□□ 1.9
SSSCA1-205ENST00000527920 GTF2A1P52655 376 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 AANATQ16613 207 aa26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 OGFRL1Q5TC84 451 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 ZNF529Q6P280 563 aa26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 PPP1R35Q8TAP8 253 aa26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 CPNE2Q96FN4 548 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 AJUBAQ96IF1 538 aa26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 SPACA5Q96QH8 159 aa26.91■■□□□ 1.9
SSSCA1-205ENST00000527920 hADV38S2A0JD32 116 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 PSPNO60542 156 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 MYL12AP19105 171 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 KISS1Q15726 138 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 GRK1Q15835 563 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 OR52N4Q8NGI2 321 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 GPR148Q8TDV2 347 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 RGP1Q92546 391 aaPredicted RBP26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 MEGF9Q9H1U4 602 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 PCDHGB5Q9Y5G0 923 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 LINC00312Q9Y6C7 94 aa26.9■■□□□ 1.9
SSSCA1-205ENST00000527920 CLPSL1A2RUU4 121 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 MGST3O14880 152 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 HCKP08631 526 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 GABRR1P24046 479 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 ERP29P30040 261 aaKnown RBP26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 ZP1P60852 638 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 MED21Q13503 144 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 OLFML2AQ68BL7 652 aa26.89■■□□□ 1.9
SSSCA1-205ENST00000527920 MGAM2Q2M2H8 2515 aa26.89■■□□□ 1.89
SSSCA1-205ENST00000527920 SH2D1BO14796 132 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 DUSP1P28562 367 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 CAPGP40121 348 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 OR2G6Q5TZ20 316 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 XAF1Q6GPH4 301 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 TCF23Q7RTU1 214 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 RNF144BQ7Z419 303 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 OR5D18Q8NGL1 313 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 OR52N1Q8NH53 320 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF714Q96N38 554 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF696Q9H7X3 374 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 EXOSC4Q9NPD3 245 aaKnown RBP26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 BABAM2Q9NXR7 383 aa26.88■■□□□ 1.89
SSSCA1-205ENST00000527920 CD2P06729 351 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms