RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TTTY10Q9BZA0 68 aa11.6□□□□□ -0.55
CAPN1-212ENST00000527887 RBM38Q9H0Z9 239 aaKnown RBP11.6□□□□□ -0.55
CAPN1-212ENST00000527887 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
CAPN1-212ENST00000527887 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
CAPN1-212ENST00000527887 SLC22A13Q9Y226 551 aa11.6□□□□□ -0.55
CAPN1-212ENST00000527887 VWFP04275 2813 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 ANKRD61A6NGH8 418 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 J3QRE1 110 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 SYNGR1O43759 233 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 GATBO75879 557 aaKnown RBP11.59□□□□□ -0.55
CAPN1-212ENST00000527887 MYL12AP19105 171 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 C21orf33P30042 268 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-212ENST00000527887 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 FUT6P51993 359 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 GTF2A1P52655 376 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-212ENST00000527887 TMBIM6P55061 237 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 ACTC1P68032 377 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 ACTA1P68133 377 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 KLRD1Q13241 179 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 C11orf88Q6PI97 169 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 PLEKHG7Q6ZR37 379 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 Q6ZSV7 163 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 ZNF367Q7RTV3 350 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 CATSPERDQ86XM0 798 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 NANOGP1Q8N7R0 232 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 MND1Q9BWT6 205 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 PLEKHA1Q9HB21 404 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 SEBOXQ9HB31 216 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-212ENST00000527887 RAB18Q9NP72 206 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 GPR173Q9NS66 373 aa11.59□□□□□ -0.55
CAPN1-212ENST00000527887 A0A1W2PQL4 384 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-212ENST00000527887 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-212ENST00000527887 SYT7O43581 403 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 TFF1P04155 84 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 TK1P04183 234 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 CHRM2P08172 466 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 ERVK11-1P61568 191 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 NEDD8Q15843 81 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 DMRTC1Q5HYR2 192 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 TMEM200BQ69YZ2 307 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 HCP5Q6MZN7 132 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 KCTD20Q7Z5Y7 419 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 ACBD7Q8N6N7 88 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 OR52N1Q8NH53 320 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 MRPL48Q96GC5 212 aaKnown RBP11.58□□□□□ -0.56
CAPN1-212ENST00000527887 MMP27Q9H306 513 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 FBLN5Q9UBX5 448 aa11.58□□□□□ -0.56
CAPN1-212ENST00000527887 A0A1W2PRD5 423 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 A0A1W2PRF3 423 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 A0A1W2PRM7 423 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 K7N7A8 449 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 ANGPTL7O43827 346 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 RPP14O95059 124 aaKnown RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 RBP4P02753 201 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 GP2P55259 537 aaKnown RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 LGALS4P56470 323 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 ERVFRD-1P60508 538 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 BDH1Q02338 343 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 SRSF4Q08170 494 aaKnown RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 SPHARQ15513 63 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 LIAT1Q6ZQX7 453 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 MKXQ8IYA7 352 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 Q8IYB0 196 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 C11orf42Q8N5U0 333 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 DNAAF1Q8NEP3 725 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 OR10H4Q8NGA5 316 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 HAVCR2Q8TDQ0 301 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 SSX3Q99909 188 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 ELL3Q9HB65 397 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 TCF7L1Q9HCS4 588 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 LSM2Q9Y333 95 aaKnown RBP11.57□□□□□ -0.56
CAPN1-212ENST00000527887 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
CAPN1-212ENST00000527887 CMYA5Q8N3K9 4069 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 DLX1P56177 255 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-212ENST00000527887 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 TMEM244Q5VVB8 128 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 ASPHD2Q6ICH7 369 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 TMPRSS11AQ6ZMR5 421 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 SSX6Q7RTT6 188 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 FAM220AQ7Z4H9 259 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 ANGPTL5Q86XS5 388 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 ANKRD13BQ86YJ7 626 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 PNKDQ8N490 385 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 RAB2BQ8WUD1 216 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 CEP19Q96LK0 163 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 TBX5Q99593 518 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 CHST5Q9GZS9 411 aa11.56□□□□□ -0.56
CAPN1-212ENST00000527887 FAM230AA0A1W2PPH8 454 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 A6NIN4 97 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 C17orf98A8MV24 154 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 H3BUX3 64 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 MYL12BO14950 172 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 INMTO95050 263 aa11.55□□□□□ -0.56
CAPN1-212ENST00000527887 LIMS3P0CW19 117 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms