RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 FAM220AQ7Z4H9 259 aa18.04■□□□□ 0.48
TRAPPC4-208ENST00000527680 TRAPPC6BQ86SZ2 158 aa18.04■□□□□ 0.48
TRAPPC4-208ENST00000527680 Q8IYB0 196 aa18.04■□□□□ 0.48
TRAPPC4-208ENST00000527680 RIBC2Q9H4K1 309 aa18.04■□□□□ 0.48
TRAPPC4-208ENST00000527680 XPNPEP2O43895 674 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 IGHA1P01876 353 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 OCM2P0CE71 109 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 OCMP0CE72 109 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 CALCBP10092 127 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 MTCP1P56278 107 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 TP53I3Q53FA7 332 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 FBLN7Q53RD9 439 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 MINOS1Q5TGZ0 78 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 FAM58AQ8N1B3 248 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 Q8N2B8 174 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 PRSS35Q8N3Z0 413 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 OR4F17Q8NGA8 305 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 OR52N4Q8NGI2 321 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 RFKQ969G6 155 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 C10orf35Q96D05 121 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 OR4F4Q96R69 305 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 GABARAPL1Q9H0R8 117 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 MMP28Q9H239 520 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 IL36RNQ9UBH0 155 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 LINC00312Q9Y6C7 94 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 SESN1Q9Y6P5 492 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 MINOS1-NBL1R4GNA1 71 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 NOTCH3Q9UM47 2321 aa18.03■□□□□ 0.48
TRAPPC4-208ENST00000527680 LOC107986453A0A1B0GWG9 222 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 UBCP0CG48 685 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 JUNBP17275 347 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 PRKACAP17612 351 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 BCL3P20749 454 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 NPBWR2P48146 333 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 BLCAPP62952 87 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 OXLD1Q5BKU9 147 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 C1orf146Q5VVC0 180 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 NDUFA11Q86Y39 141 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 OR8J1Q8NGP2 316 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 PP6455Q8WZ26 134 aa18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 CITED2Q99967 270 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 RBFOX1Q9NWB1 397 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-208ENST00000527680 IGHV2-26A0A0B4J1V2 119 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 FCGR1AP12314 374 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 VDAC2P45880 294 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 RASSF2P50749 326 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 DYNLT3P51808 116 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 TMED1Q13445 227 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 TMEM244Q5VVB8 128 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 ZBTB49Q6ZSB9 765 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 TCF23Q7RTU1 214 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 DNAAF1Q8NEP3 725 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 SGCDQ92629 289 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 STMN2Q93045 179 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 EME1Q96AY2 570 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 FGGYQ96C11 551 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 CLEC7AQ9BXN2 247 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 TMEM133Q9H2Q1 129 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 KIAA2026Q5HYC2 2103 aa18.01■□□□□ 0.47
TRAPPC4-208ENST00000527680 MGST3O14880 152 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 PSPNO60542 156 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 ALDOBP05062 364 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 ZNF20P17024 532 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 PRKACBP22694 351 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 HTR1DP28221 377 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 CDC42P60953 191 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 ZNF91Q05481 1191 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 KPRPQ5T749 579 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-208ENST00000527680 Q6ZS46 218 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 REC114Q7Z4M0 266 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 CAPSLQ8WWF8 208 aa18■□□□□ 0.47
TRAPPC4-208ENST00000527680 ADAT3Q96EY9 351 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-208ENST00000527680 SEBOXQ9HB31 216 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-208ENST00000527680 TRBV2A0A0J9YWF9 115 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 SIRPB1O00241 398 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 SH2D1BO14796 132 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 ATF1P18846 271 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 KIR3DL2P43630 455 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 ZNF85Q03923 595 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 BNIP1Q12981 228 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 IL18R1Q13478 541 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 IMPAD1Q9NX62 359 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 GSTK1Q9Y2Q3 226 aa17.99■□□□□ 0.47
TRAPPC4-208ENST00000527680 AZGP1P25311 298 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 SCN1BQ07699 218 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 KPNB1Q14974 876 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 ZNF146Q15072 292 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 OR52W1Q6IF63 320 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 LHFPL2Q6ZUX7 228 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 CENPVQ7Z7K6 275 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 ABHD12Q8N2K0 398 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 OR5AU1Q8NGC0 362 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 OR2G2Q8NGZ5 317 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 RFT1Q96AA3 541 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 CENPNQ96H22 339 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 WNT10AQ9GZT5 417 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 OAZ3Q9UMX2 235 aa17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 UBE2J1Q9Y385 318 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-208ENST00000527680 TRGV10A0A0A0MS01 117 aa17.97■□□□□ 0.47
TRAPPC4-208ENST00000527680 IGKV1-9A0A0C4DH69 117 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms