RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 PMS2CLQ68D20 193 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 BCDIN3DQ7Z5W3 292 aaKnown RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 BATF2Q8N1L9 274 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SYS1Q8N2H4 156 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SPICQ8N5J4 248 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF418Q8TF45 676 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 LRRC29Q8WV35 223 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 EGLN2Q96KS0 407 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 CDCA4Q9BXL8 241 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 ZMIZ1Q9ULJ6 1067 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 PYCARD-AS1I3L0S3 204 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 RER1O15258 196 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 GHRHP01286 108 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 INHBBP09529 407 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF883P0CG24 379 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 PIGAP37287 484 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SLC19A1P41440 591 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 ELFN2Q5R3F8 820 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 C19orf48Q6RUI8 117 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 TAS1R1Q7RTX1 841 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 RBM45Q8IUH3 476 aaKnown RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 AUNIPQ9H7T9 357 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 COL4A5P29400 1685 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 LRRC37AA6NMS7 1700 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 M0R135 149 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 C1orf105O95561 183 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 FGF8P55075 233 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 C1QTNF12Q5T7M4 302 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 PRSS54Q6PEW0 395 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 H1FNTQ75WM6 255 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-216ENST00000527467 LHFPL4Q7Z7J7 247 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SFTPA2Q8IWL1 248 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SFTPA1Q8IWL2 248 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 OR2C3Q8N628 320 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM255BQ8WV15 326 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 PELI1Q96FA3 418 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF799Q96GE5 643 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 CSF3RQ99062 836 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SIGMAR1Q99720 223 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 HS3ST2Q9Y278 367 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 TIMM10BQ9Y5J6 103 aa6.48□□□□□ -1.37
CTNND1-216ENST00000527467 SBF1O95248 1867 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HMX2A2RU54 273 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 PTGESO14684 152 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HLA-DRB1P01911 266 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SSR4P51571 173 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 RAG2P55895 527 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SYT14P1Q58G82 188 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 CLEC18BQ6UXF7 455 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF788Q6ZQV5 615 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 LILRA2Q8N149 483 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 CBARPQ8N350 705 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 OR4S2Q8NH73 311 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 ZDHHC16Q969W1 377 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF764Q96H86 408 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SAP30LQ9HAJ7 183 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HSF4Q9ULV5 492 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 A4GNTQ9UNA3 340 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 PPP1R17O96001 155 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SEMG1P04279 462 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 GABRA1P14867 456 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 FKBP2P26885 142 aaKnown RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 YBX1P67809 324 aaKnown RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HERPUD1Q15011 391 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 LIAT1Q6ZQX7 453 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SHISA6Q6ZSJ9 500 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 MOGAT3Q86VF5 341 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM105Q8N8V8 129 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 DEFB108BQ8NET1 73 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 OR5A1Q8NGJ0 315 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SLAMF6Q96DU3 332 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 CHST8Q9H2A9 424 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 AKIP1Q9NQ31 210 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 FBXL17Q9UF56 701 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 LOXL2Q9Y4K0 774 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 MYO9BQ13459 2157 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 TRAV8-2A0A0B4J237 113 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SPAARA0A1B0GVQ0 90 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 J3QKU1 62 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 HCRTR1O43613 425 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 FCMRO60667 390 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 NDUFB6O95139 128 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 CYB5R3P00387 301 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 PTGER1P34995 402 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SRP14P37108 136 aaKnown RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 IGFBP7Q16270 282 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 CDKN3Q16667 212 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 PYCR3Q53H96 274 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 MOB3BQ86TA1 216 aa6.47□□□□□ -1.37
CTNND1-216ENST00000527467 SNRNP40Q96DI7 357 aaKnown RBP6.47□□□□□ -1.37
CTNND1-216ENST00000527467 TRMT61AQ96FX7 289 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms