RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 E9PQ18 207 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 ANXA8P13928 327 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 PRKACGP22612 351 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 CD24P25063 80 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 PEX2P28328 305 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-210ENST00000527027 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 SLX4IPQ5VYV7 408 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 EGFL6Q8IUX8 553 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 TPRX1Q8N7U7 411 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 OR52N4Q8NGI2 321 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 TRMT10AQ8TBZ6 339 aaKnown RBP12.85□□□□□ -0.35
PTPRU-210ENST00000527027 B9D2Q9BPU9 175 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 DPM3Q9P2X0 92 aa12.85□□□□□ -0.35
PTPRU-210ENST00000527027 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-210ENST00000527027 MMP23AO75900 390 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 INMTO95050 263 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 GABRR1P24046 479 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 CXCR4P61073 352 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 GRK1Q15835 563 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 C10orf99Q6UWK7 81 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 ADGRG5Q8IZF4 528 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 HS3ST5Q8IZT8 346 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 ABHD12Q8N2K0 398 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 DPF1Q92782 380 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 CNN2Q99439 309 aaKnown RBP12.84□□□□□ -0.35
PTPRU-210ENST00000527027 SLC25A33Q9BSK2 321 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
PTPRU-210ENST00000527027 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 OR2F2O95006 317 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 HAND1O96004 215 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 IGHA1P01876 353 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 CCL1P22362 96 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 FUT6P51993 359 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 BDH1Q02338 343 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 UBE2V2Q15819 145 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 SLC25A26Q70HW3 274 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
PTPRU-210ENST00000527027 RBM14Q96PK6 669 aaKnown RBP12.83□□□□□ -0.36
PTPRU-210ENST00000527027 MNTQ99583 582 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 CHST6Q9GZX3 395 aa12.83□□□□□ -0.36
PTPRU-210ENST00000527027 PSPNO60542 156 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 AMY1AP04745 511 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 AMY2AP04746 511 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
PTPRU-210ENST00000527027 CRISP1P54107 249 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 ZNF91Q05481 1191 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 OR52W1Q6IF63 320 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 MEPCEQ7L2J0 689 aaKnown RBP12.82□□□□□ -0.36
PTPRU-210ENST00000527027 RTN4RL2Q86UN3 420 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 MRPL41Q8IXM3 137 aaKnown RBP12.82□□□□□ -0.36
PTPRU-210ENST00000527027 SLC35F2Q8IXU6 374 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 CANT1Q8WVQ1 401 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 IL36RNQ9UBH0 155 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 MRM2Q9UI43 246 aaKnown RBP12.82□□□□□ -0.36
PTPRU-210ENST00000527027 HHLA2Q9UM44 414 aa12.82□□□□□ -0.36
PTPRU-210ENST00000527027 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-210ENST00000527027 SH2D7A6NKC9 451 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-210ENST00000527027 LEUTXA8MZ59 168 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 ZNF670-ZNF695F2Z2N8 137 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 MGST3O14880 152 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 PRKYO43930 277 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 IGLV1-47P01700 117 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 DUSP1P28562 367 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 ZFP1Q6P2D0 407 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 BAIAP2L2Q6UXY1 529 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 Q8IYB0 196 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 OSR2Q8N2R0 312 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 UTP4Q969X6 686 aaKnown RBP12.81□□□□□ -0.36
PTPRU-210ENST00000527027 CLN6Q9NWW5 311 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 H2AFY2Q9P0M6 372 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-210ENST00000527027 DSCAML1Q8TD84 2053 aa12.81□□□□□ -0.36
PTPRU-210ENST00000527027 TCRBV3S1A0A5B6 114 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 M0QZK8 103 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 SYT7O43581 403 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 GATBO75879 557 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 RPP14O95059 124 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 SERPINA3P01011 423 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 P2RX3P56373 397 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 DCTN2Q13561 401 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 ZNF146Q15072 292 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 ODF4Q2M2E3 257 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 C9orf152Q5JTZ5 239 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 BCDIN3DQ7Z5W3 292 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 FAM58AQ8N1B3 248 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms