RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TSPAN14Q8NG11 270 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 RNF133Q8WVZ7 376 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 SPTSSAQ969W0 71 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 OR8B4Q96RC9 309 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 AMELYQ99218 206 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 COQ7Q99807 217 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ATF6BQ99941 703 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 RHNO1Q9BSD3 238 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 MED18Q9BUE0 208 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 CDCA4Q9BXL8 241 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 HDHD2Q9H0R4 259 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 HEATR1Q9H583 2144 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 NIPAL2Q9H841 368 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 SP140LQ9H930 580 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ELOVL3Q9HB03 270 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 NOX3Q9HBY0 568 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZFP57Q9NU63 452 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 PAK1IP1Q9NWT1 392 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 BABAM2Q9NXR7 383 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 SLCO1C1Q9NYB5 712 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 EIF3KQ9UBQ5 218 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 IKZF2Q9UKS7 526 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 COPS3Q9UNS2 423 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 PLEKHA6Q9Y2H5 1048 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 KLHDC2Q9Y2U9 406 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 GRIP1Q9Y3R0 1128 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 CMAHPQ9Y471 501 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 IGHV1-18A0A0C4DH31 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 TMEM269A0A1B0GVZ9 245 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 TMEM129A0AVI4 362 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 C5orf49A4QMS7 147 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OR6C6A6NF89 314 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 DPRXA6NFQ7 191 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ACOD1A6NK06 481 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF878C9JN71 531 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 MYL12BO14950 172 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 RPP14O95059 124 aaKnown RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 IGKV3-15P01624 115 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 IGLV1-44P01699 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ADRA2AP08913 450 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 LIMS3P0CW19 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 LIMS4P0CW20 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 PSKH1P11801 424 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 CCL2P13500 99 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF35P13682 527 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF14P17017 642 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 CRYGSP22914 178 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OPRL1P41146 370 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 MAP2K4P45985 399 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 HOXA1P49639 335 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 PRKXP51817 358 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 WNT4P56705 351 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ACTA2P62736 377 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ACTG2P63267 376 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 EMX1Q04741 257 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 GAGE5Q13069 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 GAGE6Q13070 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SCGB2A2Q13296 93 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SPHARQ15513 63 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 RSPO1Q2MKA7 263 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 TP53I3Q53FA7 332 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SPATA46Q5T0L3 261 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF684Q5T5D7 378 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OR2G6Q5TZ20 316 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF544Q6NX49 715 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 RPL22L1Q6P5R6 122 aaKnown RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF773Q6PK81 442 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 DRAM2Q6UX65 266 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 CLEC18BQ6UXF7 455 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 LRRN1Q6UXK5 716 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SSX6Q7RTT6 188 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 NAA40Q86UY6 237 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF573Q86YE8 665 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF584Q8IVC4 421 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 C1orf174Q8IYL3 243 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 BATF2Q8N1L9 274 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SYS1Q8N2H4 156 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SLC30A7Q8NEW0 376 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OR5L1Q8NGL2 311 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OR10S1Q8NGN2 331 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 OR52N1Q8NH53 320 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 HAVCR2Q8TDQ0 301 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 FAM222BQ8WU58 562 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 SPRYD4Q8WW59 207 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 SLC7A6Q92536 515 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 TMIGD2Q96BF3 282 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 POM121L2Q96KW2 1035 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 C4orf36Q96KX1 117 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 C4orf45Q96LM5 186 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF75AQ96N20 296 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ASCL2Q99929 193 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 KCNS3Q9BQ31 491 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF649Q9BS31 505 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 MND1Q9BWT6 205 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 TTTY10Q9BZA0 68 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms