RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 APODP05090 189 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 CSF3P09919 207 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TSPAN19P0C672 248 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 MYL2P10916 166 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 LAMP1P11279 417 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PGAM2P15259 253 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 FUT3P21217 361 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 KITLGP21583 273 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 STOMP27105 288 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 APLNRP35414 380 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RPS9P46781 194 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 QARSP47897 775 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 PPT1P50897 306 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 CKS1BP61024 79 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PPP3R1P63098 170 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 LCN2P80188 198 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 NME3Q13232 169 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 EXOSC2Q13868 293 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 RAB35Q15286 201 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 ZIC1Q15915 447 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 NRF1Q16656 503 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 QRICH1Q2TAL8 776 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TMEM176BQ3YBM2 270 aaPredicted RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 ACSM3Q53FZ2 586 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 CYBRD1Q53TN4 286 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RBM48Q5RL73 367 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 C6orf52Q5T4I8 152 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 IDNKQ5T6J7 187 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 C1orf189Q5VU69 101 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RHBDD2Q6NTF9 364 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TMEM205Q6UW68 189 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 APOBEC3FQ8IUX4 373 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 MFSD6LQ8IWD5 586 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 DAW1Q8N136 415 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 GABRG1Q8N1C3 465 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 ACBD7Q8N6N7 88 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 YIPF7Q8N8F6 280 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 BPIFB6Q8NFQ5 453 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 SLC26A10Q8NG04 563 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 OR8D4Q8NGM9 314 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 OR4D5Q8NGN0 318 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 OR1L6Q8NGR2 347 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 OR5J2Q8NH18 312 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 OR4L1Q8NH43 312 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TERB2Q8NHR7 220 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RXFP4Q8TDU9 374 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RNF138Q8WVD3 245 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 C10orf82Q8WW14 230 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TMEM239Q8WW34 195 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PIGCQ92535 297 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 LHX4Q969G2 390 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 MCHR2Q969V1 340 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 HIST1H2BAQ96A08 127 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 MRPL53Q96EL3 112 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 CXorf58Q96LI9 332 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 VSTM2LQ96N03 204 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RBP7Q96R05 134 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 ARHGDIGQ99819 225 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 HCAR1Q9BXC0 346 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 C1QTNF6Q9BXI9 259 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 MS4A8Q9BY19 250 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TMEM231Q9H6L2 316 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 WDR76Q9H967 626 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 LRTM1Q9HBL6 345 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 FAM49BQ9NUQ9 324 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 NLE1Q9NVX2 485 aaPredicted RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 PAK1IP1Q9NWT1 392 aaPredicted RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 SLC2A8Q9NY64 477 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PRODH2Q9UF12 536 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 FLVCR2Q9UPI3 526 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RNF6Q9Y252 685 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 WDR45Q9Y484 360 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 HSPB11Q9Y547 144 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 ITSN1Q15811 1721 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 KNDC1Q76NI1 1749 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 LMO7Q8WWI1 1683 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 A0A096LPI6 279 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 IGKV6D-21A0A0A0MT36 114 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 TMEM72A0PK05 275 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 C20orf202A1L168 122 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 FRG2CA6NGY1 282 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 SMIM9A6NGZ8 99 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 SEC14L6B5MCN3 397 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 C21orf140B9A014 251 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 F5H5T6 163 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 K7ERI5 159 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 M0R036 132 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 PDCD5O14737 125 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 TIMM8AO60220 97 aaPredicted RBP2.72□□□□□ -1.97
CD44-217ENST00000525348 CNIH1O95406 144 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 MPC2O95563 127 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 TMEM50AO95807 157 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 MT-ND4P03905 459 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 CD74P04233 296 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 CST2P09228 141 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 OR56A5P0C7T3 313 aa2.72□□□□□ -1.97
CD44-217ENST00000525348 CT45A8P0DMV1 189 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms