RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PCTPQ9UKL6 214 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 FOXJ3Q9UPW0 622 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 AURKCQ9UQB9 309 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 POFUT2Q9Y2G5 429 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IFT52Q9Y366 437 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TMED7Q9Y3B3 224 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TIMM10BQ9Y5J6 103 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PKHD1L1Q86WI1 4243 aa1.09□□□□□ -2.24
CD44-212ENST00000524922 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 NACAE9PAV3 2078 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 LOC100509620A0A075B734 347 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 A0A087WUJ7 227 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 A0A087WZ39 114 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 IGHV3-15A0A0B4J1V0 119 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 KIR2DL5BA0A0G2JN68 375 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 KIR2DL5BA0A0G2JPC4 375 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 GNG14A0A1W2PPG7 69 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TMEM72A0PK05 275 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PSMB11A5LHX3 300 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OR6C6A6NF89 314 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 FAM159BA6NKW6 160 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TMEM210A6NLX4 147 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF726A6NNF4 738 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 C17orf51A8MQB3 221 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 C17orf98A8MV24 154 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TMEM114B3SHH9 223 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SEC14L6B5MCN3 397 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 H3BUA1 57 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SAP18O00422 153 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 OR7A17O14581 309 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 MAGEB3O15480 346 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TPD52L2O43399 206 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 CHST1O43916 411 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 AIREO43918 545 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TIMM8AO60220 97 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 MTRF1O75570 445 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 LYPD3O95274 346 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PDYNP01213 254 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 IGLV1-51P01701 117 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 IGHV3-9P01782 118 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 IGHG4P01861 327 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HLA-HP01893 362 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ANXA4P09525 319 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 SBK2P0C263 348 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ADORA3P0DMS8 318 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ETS2P15036 469 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 B4GALT1P15291 398 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 CFL1P23528 166 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 CXCR1P25024 350 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PSMB8P28062 276 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 CD34P28906 385 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 GTF2E2P29084 291 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 BRS3P32247 399 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 BMI1P35226 326 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SERPINB5P36952 375 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HPCAL1P37235 193 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 NAA10P41227 235 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 RPS5P46782 204 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 CSNK1A1P48729 337 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 GDI2P50395 445 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 DAP3P51398 398 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 SLC25A1P53007 311 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 UBASH3AP57075 661 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OR2B6P58173 313 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PPP1CBP62140 327 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 LSM6P62312 80 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 CRADDP78560 199 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HPCAP84074 193 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 BDH1Q02338 343 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF45Q02386 682 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF616Q08AN1 781 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HSPB3Q12988 150 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 AQP6Q13520 282 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 EBI3Q14213 229 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OPCMLQ14982 345 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 MAD2L1BPQ15013 274 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 OR4D1Q15615 310 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TOMM34Q15785 309 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 HAGHQ16775 308 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 NSUN5P1Q3KNT7 163 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 FAM106AQ4KMX7 169 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 LRRC10Q5BKY1 277 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 FGD3Q5JSP0 725 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 THEM4Q5T1C6 240 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PDZK1Q5T2W1 519 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 STUMQ69YW2 141 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HCP5Q6MZN7 132 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ULK3Q6PHR2 472 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SASS6Q6UVJ0 657 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 Q6ZR03 302 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 MSANTD1Q6ZTZ1 278 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 GDPD3Q7L5L3 318 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 C16orf62Q7Z3J2 963 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PEX26Q7Z412 305 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TSEN54Q7Z6J9 526 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 LRP11Q86VZ4 500 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SLC22A9Q8IVM8 553 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PEX5LQ8IYB4 626 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 CENPLQ8N0S6 344 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 KIR2DL5AQ8N109 375 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms