RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SNAPC3Q92966 411 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 S100PBPQ96BU1 408 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 RADILQ96JH8 1075 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 DHRS9Q9BPW9 319 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 BCL2L14Q9BZR8 327 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 SPACA1Q9HBV2 294 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 IFT46Q9NQC8 304 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 ELOVL5Q9NYP7 299 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 EIF3KQ9UBQ5 218 aaKnown RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 NDRG3Q9UGV2 375 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 POLQO75417 2590 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 RAI1Q7Z5J4 1906 aaPredicted RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 MEIKINA0A087WXM9 373 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 A0A096LPE4 126 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 A0A1W2PPZ6 126 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 A0A1W2PR80 420 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 C5orf63A6NC05 138 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 ZNF503-AS2A6NEH8 195 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 TMEM235A6NFC5 223 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 OR5H1A6NKK0 313 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 TMEM210A6NLX4 147 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 ANKRD30BLA7E2S9 258 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 CD300LBA8K4G0 201 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 PLAUP00749 431 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 FCER2P06734 321 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 PATE4P0C8F1 98 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 IGHV1-2P23083 117 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 ANOS1P23352 680 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 VEGFCP49767 419 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 CCR6P51684 374 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 FOXG1P55316 489 aaPredicted RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 TMEM50BP56557 158 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 TAS2R31P59538 309 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 IL24Q13007 206 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 MADCAM1Q13477 382 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 MOGAT2Q3SYC2 334 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 SLC22A6Q4U2R8 563 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 HIKESHIQ53FT3 197 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 FAM76BQ5HYJ3 339 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 PLAC9Q5JTB6 97 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 C9orf135Q5VTT2 229 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 PLCXD3Q63HM9 321 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 TRAPPC6BQ86SZ2 158 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 NOXA1Q86UR1 476 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 MDP1Q86V88 176 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 OSR2Q8N2R0 312 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 SPERTQ8NA61 448 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 ZBTB8BQ8NAP8 495 aaPredicted RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 HYLS1Q96M11 299 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 GINS4Q9BRT9 223 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 SELENOIQ9C0D9 397 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 RIMS4Q9H426 269 aaPredicted RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 RANBP3Q9H6Z4 567 aaPredicted RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 PLEKHF2Q9H8W4 249 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 UBTD1Q9HAC8 227 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 GPR173Q9NS66 373 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 N6AMT1Q9Y5N5 214 aa6.04□□□□□ -1.44
VPS11-201ENST00000524454 ANKRD17O75179 2603 aaKnown RBP6.04□□□□□ -1.44
VPS11-201ENST00000524454 PRR14LQ5THK1 2151 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 IGKV1-27A0A075B6S5 117 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 TRAV6A0A075B6T7 132 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 A0A0A6YYD4 124 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 FAM172BPA6NC97 362 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 IQCF6A8MYZ5 107 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RGS13O14921 159 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 ARPC1BO15143 372 aaKnown RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 SSX5O60225 188 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 SMPD2O60906 423 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 PDCD6O75340 191 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RAD51DO75771 328 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR2A4O95047 310 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 DIRAS3O95661 229 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 GIPP09681 153 aaPredicted RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 ZNF735P0CB33 412 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 HLA-GP17693 338 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 IL32P24001 234 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 LOXP28300 417 aaPredicted RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 CHATP28329 748 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 BLVRBP30043 206 aaPredicted RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 WNT5AP41221 380 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RAD52P43351 418 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 GZMKP49863 264 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RBM11P57052 281 aaKnown RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 RAP2BP61225 183 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 FGF12P61328 243 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 GNG3P63215 75 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 MZT1Q08AG7 82 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 PRDX4Q13162 271 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 IL13RA2Q14627 380 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 GRK1Q15835 563 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 TMEM255AQ5JRV8 349 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 TIMM23BQ5SRD1 257 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR10K2Q6IF99 312 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 IDO2Q6ZQW0 420 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 BHLHA15Q7RTS1 189 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms