RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZC4H2Q9NQZ6 224 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CISD1Q9NZ45 108 aaKnown RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF225Q9UK10 706 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 KLHDC2Q9Y2U9 406 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NSG2Q9Y328 171 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SLC6A5Q9Y345 797 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TPRKBQ9Y3C4 175 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NUBP2Q9Y5Y2 271 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 V9GYY9 64 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 LOC100130705A0A1B0GUX0 176 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 FAM220BPB1ANY3 271 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 M0R036 132 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 RRHO14718 337 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TAPBPO15533 448 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TGOLN2O43493 480 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GATBO75879 557 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 CCNKO75909 580 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 UTS2O95399 124 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TSPAN13O95857 204 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ALPLP05186 524 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 KLK1P06870 262 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PRSS56P0CW18 603 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SLC2A1P11166 492 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 BCKDHAP12694 445 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 S100PP25815 95 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 IL12AP29459 219 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SHMT2P34897 504 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 RPL3P39023 403 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 YAP1P46937 504 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 P2RY1P47900 373 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SERPINB10P48595 397 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 IDH2P48735 452 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM50BP56557 158 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 OR4D2P58180 307 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PLGLB1Q02325 96 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ZP4Q12836 540 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TRAF3Q13114 568 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GGTLC2Q14390 218 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 KIAA0040Q15053 153 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GABRA6Q16445 453 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF658BQ4V348 819 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TIMM23BQ5SRD1 257 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ENPP6Q6UWR7 440 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 UNQ6126/PRO20091Q6UXV3 157 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 Q6ZSR3 168 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 AHSA2Q719I0 299 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 NUFIP2Q7Z417 695 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SERPINA11Q86U17 422 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 CALHM1Q8IU99 346 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 RNF113BQ8IZP6 322 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PAQR4Q8N4S7 273 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 NPEPL1Q8NDH3 523 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 OR2L5Q8NG80 312 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 OR52N4Q8NGI2 321 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 OR2T11Q8NH01 316 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 OR10A6Q8NH74 314 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM163Q8TC26 289 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SLC38A5Q8WUX1 472 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SKA2Q8WVK7 121 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 S100ZQ8WXG8 99 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 BORCS5Q969J3 196 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ERGIC1Q969X5 290 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PTH2Q96A98 100 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 APH1AQ96BI3 265 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TESCQ96BS2 214 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ISOC1Q96CN7 298 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TMEM80Q96HE8 168 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 COL21A1Q96P44 957 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TBX15Q96SF7 602 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 COPS4Q9BT78 406 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF717Q9BY31 904 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 LAT2Q9GZY6 243 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PCBD2Q9H0N5 130 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 MMP28Q9H239 520 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SYT4Q9H2B2 425 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 SLC17A5Q9NRA2 495 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 DCAF13Q9NV06 445 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 C14orf105Q9NVL8 296 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 KLHL13Q9P2N7 655 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 GLS2Q9UI32 602 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PDE10AQ9Y233 779 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 MRPS28Q9Y2Q9 187 aaKnown RBP4.28□□□□□ -1.72
PABPC1-223ENST00000523636 PRELID3BQ9Y3B1 194 aa4.28□□□□□ -1.72
PABPC1-223ENST00000523636 TRBV9A0A0B4J1U6 114 aa4.27□□□□□ -1.73
PABPC1-223ENST00000523636 H0Y980 276 aa4.27□□□□□ -1.73
PABPC1-223ENST00000523636 GFYI3L273 518 aa4.27□□□□□ -1.73
PABPC1-223ENST00000523636 K7EIL1 84 aa4.27□□□□□ -1.73
PABPC1-223ENST00000523636 CCRL2O00421 344 aa4.27□□□□□ -1.73
PABPC1-223ENST00000523636 PPP1R2P9O14990 202 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms