RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 BANF2Q9H503 90 aa9.98□□□□□ -0.81
PVT1-215ENST00000522963 RHOFQ9HBH0 211 aa9.98□□□□□ -0.81
PVT1-215ENST00000522963 RASL12Q9NYN1 266 aa9.98□□□□□ -0.81
PVT1-215ENST00000522963 WIPI2Q9Y4P8 454 aa9.98□□□□□ -0.81
PVT1-215ENST00000522963 PPIAL4AQ9Y536 164 aa9.98□□□□□ -0.81
PVT1-215ENST00000522963 SONP18583 2426 aaKnown RBP9.98□□□□□ -0.81
PVT1-215ENST00000522963 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 TMEM127O75204 238 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 ZNF780AO75290 641 aaPredicted RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 CRTAPO75718 401 aaPredicted RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 MPIG6BO95866 241 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 CSTBP04080 98 aaKnown RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 TFF1P04155 84 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 IGHV4-31P0DP07 118 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 ZNF16P17020 682 aaPredicted RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 IL2RGP31785 369 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 RANBP1P43487 201 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 BMXP51813 675 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 EFNB2P52799 333 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 BTG1P62324 171 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 SMIM21Q3B7S5 101 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 PIGYQ3MUY2 71 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 CYB5R2Q6BCY4 276 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 METAP1DQ6UB28 335 aaPredicted RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 OR2W3Q7Z3T1 314 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 FAM90A1Q86YD7 464 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 OSR2Q8N2R0 312 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 KCNG3Q8TAE7 436 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 TIMD4Q96H15 378 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 SLIRPQ9GZT3 109 aaKnown RBP9.97□□□□□ -0.81
PVT1-215ENST00000522963 CST11Q9H112 138 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 TMEM165Q9HC07 324 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 PCDHB16Q9NRJ7 776 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 ABRACLQ9P1F3 81 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 NLKQ9UBE8 527 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 DNAJB11Q9UBS4 358 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 FBLN5Q9UBX5 448 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 TANC2Q9HCD6 1990 aa9.97□□□□□ -0.81
PVT1-215ENST00000522963 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
PVT1-215ENST00000522963 ZNF469Q96JG9 3925 aaPredicted RBP9.96□□□□□ -0.81
PVT1-215ENST00000522963 IGKV1D-17A0A075B6S4 117 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 TRAV38-1A0A0B4J264 116 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 CD5LO43866 347 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 FSTL3O95633 263 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 KNG1P01042 644 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 PSG2P11465 335 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 GTF2F2P13984 249 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 MUC1P15941 1255 aaPredicted RBP9.96□□□□□ -0.82
PVT1-215ENST00000522963 MGMTP16455 207 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 DUSP1P28562 367 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 SOX6P35712 828 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 CAPZA1P52907 286 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.82
PVT1-215ENST00000522963 RPS27AP62979 156 aaKnown RBP9.96□□□□□ -0.82
PVT1-215ENST00000522963 PDCD1Q15116 288 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 MICBQ29980 383 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 CNPY1Q3B7I2 92 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 NHLRC3Q5JS37 347 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 STUMQ69YW2 141 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 PEG10Q86TG7 708 aaKnown RBP9.96□□□□□ -0.82
PVT1-215ENST00000522963 LRRC28Q86X40 367 aaPredicted RBP9.96□□□□□ -0.82
PVT1-215ENST00000522963 OR51T1Q8NGJ9 327 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 CLDND2Q8NHS1 167 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 RAB1CQ92928 201 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 GAL3ST1Q99999 423 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 MRI1Q9BV20 369 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 SPATA2Q9UM82 520 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 ETV7Q9Y603 341 aa9.96□□□□□ -0.82
PVT1-215ENST00000522963 A0A0A6YYD4 124 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 OR2AT4A6NND4 320 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 TNFRSF13BO14836 293 aaPredicted RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 GYPAP02724 150 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 AMY2BP19961 511 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 RAB6AP20340 208 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 MDH2P40926 338 aaKnown RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 CEBPDP49716 269 aaPredicted RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 GZMKP49863 264 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 SCAND1P57086 179 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 DYNC1I2Q13409 638 aaKnown RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 IL13RA2Q14627 380 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ZNF146Q15072 292 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ZNF404Q494X3 552 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 CD177Q8N6Q3 437 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ANGPTL6Q8NI99 470 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ACOT12Q8WYK0 555 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 AP3S1Q92572 193 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 PTX4Q96A99 478 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 MRPS24Q96EL2 167 aaKnown RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 Q96M66 194 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms