RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	STPG1	Q5TH74	334 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	C1QL3	Q5VWW1	255 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	OR5AU1	Q8NGC0	362 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	OR6T1	Q8NGN1	323 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	OR13G1	Q8NGZ3	307 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ZNF563	Q8TA94	476 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	FNDC9	Q8TBE3	224 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ZNF418	Q8TF45	676 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	SPATA25	Q9BR10	227 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	LMF2	Q9BU23	707 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PLA2G12B	Q9BX93	195 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TRIM36	Q9NQ86	728 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	FBXL17	Q9UF56	701 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	AK3	Q9UIJ7	227 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	BOK	Q9UMX3	212 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	VDAC3	Q9Y277	283 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	YIPF1	Q9Y548	306 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	WSB1	Q9Y6I7	421 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	STRC	Q7RTU9	1775 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ARID1A	O14497	2285 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TSPAN11	A1L157	253 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	FFAR1	O14842	300 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	KLK8	O60259	260 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	NPIPB7	O75200	414 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	AGFG2	O95081	481 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	GAPDH	P04406	335 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	CEBPB	P17676	345 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	GUCA1A	P43080	201 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	RGR	P47804	291 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	CX3CR1	P49238	355 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PAX9	P55771	341 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	RPS14	P62263	151 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	CCL20	P78556	96 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	RPL24	P83731	157 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ACVR1	Q04771	509 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ZFP36L1	Q07352	338 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PNRC1	Q12796	327 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PPP1R1A	Q13522	171 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	UPP1	Q16831	310 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	DCST2	Q5T1A1	773 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PWWP2B	Q6NUJ5	590 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TRIM40	Q6P9F5	258 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TMEM184A	Q6ZMB5	413 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	SMIM5	Q71RC9	77 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	LGI3	Q8N145	548 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	CLDN19	Q8N6F1	224 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ZIC4	Q8N9L1	334 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	ADAD2	Q8NCV1	583 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	OR4D11	Q8NGI4	311 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	IGSF8	Q969P0	613 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	KTI12	Q96EK9	354 aa	Predicted RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	GPR82	Q96P67	336 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TIMP4	Q99727	224 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	LRRC61	Q9BV99	259 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	MRI	Q9BWK5	157 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	SMIM3	Q9BZL3	60 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	SYNPO2L	Q9H987	977 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275		Q9N2K0	584 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	SERTAD4	Q9NUC0	356 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	FBLN5	Q9UBX5	448 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	OR5V1	Q9UGF6	321 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TRAPPC2L	Q9UL33	140 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	KLHDC2	Q9Y2U9	406 aa		4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	CSDC2	Q9Y534	153 aa	Known RBP	4.07	□□□□□ -1.76
PCM1-215	ENST00000522275	TEX48	A0A1B0GUV7	120 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	C17orf102	A2RUQ5	167 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	SH2D1B	O14796	132 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	SLC31A1	O15431	190 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	MPPED1	O15442	326 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	CPSF4	O95639	269 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	KLKB1	P03952	638 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	HLA-DQB2	P05538	268 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	SEC11B	P0C7V7	166 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	TNFRSF1A	P19438	455 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	ELAVL4	P26378	380 aa	Known RBP	4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	MFAP4	P55083	255 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	LIM2	P55344	173 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	SIRPA	P78324	504 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	B4GALNT1	Q00973	533 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.06	□□□□□ -1.76	5e-7	■■■■□ 23.5
PCM1-215	ENST00000522275	FFAR4	Q5NUL3	377 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	ANKRD16	Q6P6B7	361 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	GLB1L	Q6UWU2	654 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	DPY19L4	Q7Z388	723 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275		Q8N976	141 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	NECAP1	Q8NC96	275 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	OR8G5	Q8NG78	346 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	OR51G1	Q8NGK1	321 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	OR4L1	Q8NH43	312 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	EID2B	Q96D98	161 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	ANAPC16	Q96DE5	110 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	PGLYRP3	Q96LB9	341 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	TMEM204	Q9BSN7	226 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	GPR174	Q9BXC1	333 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	NPFFR1	Q9GZQ6	430 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	CHST8	Q9H2A9	424 aa		4.06	□□□□□ -1.76
PCM1-215	ENST00000522275	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms