RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 NDUFS5O43920 106 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 CCDC22O60826 627 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 BRI3O95415 125 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 IGKV1D-16P01601 117 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 PSMB5P28074 263 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 Q6P435 159 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 GUSBP11Q6P575 273 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 ZCCHC24Q8N2G6 241 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 TMEM256Q8N2U0 113 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 CLHC1Q8NHS4 586 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 SFXN5Q8TD22 340 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 GTF2H4Q92759 462 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 MRPL48Q96GC5 212 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 CATSPER2Q96P56 530 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 TMED9Q9BVK6 235 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 BBS2Q9BXC9 721 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 EXOSC4Q9NPD3 245 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 ANXA10Q9UJ72 324 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 ORC6Q9Y5N6 252 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 FADS3Q9Y5Q0 445 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 PIK3C2AO00443 1686 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 IGSF9BQ9UPX0 1349 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 PRUNE2Q8WUY3 3088 aa3.16□□□□□ -1.9
CTNNA1-233ENST00000522052 IGHV6-1A0A0B4J1U7 121 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 TRPC5OSA6NMA1 111 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 RBFOX2O43251 390 aaKnown RBP eCLIP3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 VAMP5O95183 116 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 YEATS4O95619 227 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 C1GALT1C1LP0DN25 315 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 OPRK1P41145 380 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 MAGEA3P43357 314 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 CXCL12P48061 93 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 PSMB2P49721 201 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 LAMTOR4Q0VGL1 99 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 ZNF684Q5T5D7 378 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 IDNKQ5T6J7 187 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 ZNF691Q5VV52 312 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 Q5W150 140 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 NANOGP8Q6NSW7 305 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 Q6ZT83 130 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 AHSA2Q719I0 299 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 SH2D6Q7Z4S9 175 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 ENTHD1Q8IYW4 607 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 GAPTQ8N292 157 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 TTLQ8NG68 377 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 OR51Q1Q8NH59 317 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 NEURL3Q96EH8 262 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 FOPNLQ96NB1 174 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 NUDT9Q9BW91 350 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 ZNF430Q9H8G1 570 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 PLEKHF2Q9H8W4 249 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 C12orf4Q9NQ89 552 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 NLE1Q9NVX2 485 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 MS4A12Q9NXJ0 267 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 RAB26Q9ULW5 256 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 FARSAQ9Y285 508 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 CASKIN1Q8WXD9 1431 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 QSER1Q2KHR3 1735 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 NAV2Q8IVL1 2488 aa3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 USP42Q9H9J4 1324 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-233ENST00000522052 USP9XQ93008 2570 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 YTHDC2Q9H6S0 1430 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 IGLV3-16A0A075B6K0 115 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 TCAPO15273 167 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 NDUFS6O75380 124 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 GATBO75879 557 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 IGLV3-25P01717 112 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ADRA2AP08913 450 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ZNF806P0C7X5 589 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 SLC35E2BP0CK96 405 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ME2P23368 584 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 PRSS3P35030 304 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 OR4D1Q15615 310 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ZBTB6Q15916 424 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 YIF1BQ5BJH7 314 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 TEX30Q5JUR7 227 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 TMEM31Q5JXX7 168 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 LRRC6Q86X45 466 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ERO1BQ86YB8 467 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 TMEM25Q86YD3 366 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 LRRC52Q8N7C0 313 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 OR4M2Q8NGB6 313 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 OR2L8Q8NGY9 312 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 UBALD1Q8TB05 177 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 CCDC12Q8WUD4 166 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 IFT81Q8WYA0 676 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 S100PBPQ96BU1 408 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 RBMXL1Q96E39 390 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 ZNF396Q96N95 335 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 RILPQ96NA2 401 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 METTL26Q96S19 204 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 MED10Q9BTT4 135 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 SHCBP1LQ9BZQ2 653 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 VCXQ9H320 206 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 LRRC42Q9Y546 428 aa3.14□□□□□ -1.91
CTNNA1-233ENST00000522052 TPRP12270 2363 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms