RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 PDZK1IP1Q13113 114 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 RPL22L1Q6P5R6 122 aaKnown RBP11.64□□□□□ -0.55
VEGFA-221ENST00000520265 TRAPPC6BQ86SZ2 158 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 C8orf46Q8TAG6 207 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 GGHQ92820 318 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-221ENST00000520265 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-221ENST00000520265 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 EXOSC4Q9NPD3 245 aaKnown RBP11.64□□□□□ -0.55
VEGFA-221ENST00000520265 ING3Q9NXR8 418 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 TAS2R4Q9NYW5 299 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 HSPE1-MOB4S4R3N1 261 aa11.64□□□□□ -0.55
VEGFA-221ENST00000520265 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 NPFFO15130 113 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 RNASE1P07998 156 aaKnown RBP11.63□□□□□ -0.55
VEGFA-221ENST00000520265 MELTFP08582 738 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 FBP1P09467 338 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 ZNF44P15621 663 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 GRK1Q15835 563 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 CCDC58Q4VC31 144 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 ZNF782Q6ZMW2 699 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-221ENST00000520265 Q8N7P7 452 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 OR13C5Q8NGS8 318 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
VEGFA-221ENST00000520265 JAM3Q9BX67 310 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 FAM234AQ9H0X4 552 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 NOX4Q9NPH5 578 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 BABAM2Q9NXR7 383 aa11.63□□□□□ -0.55
VEGFA-221ENST00000520265 DNHD1Q96M86 4753 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 OMGP23515 440 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 SAA4P35542 130 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 AQP4P55087 323 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 ZNF273Q14593 569 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 KISS1Q15726 138 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 AWAT1Q58HT5 328 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 Q6YL49 198 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 TPRX1Q8N7U7 411 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 OR52N1Q8NH53 320 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 PPP1R35Q8TAP8 253 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 TNFAIP8L1Q8WVP5 186 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 RGP1Q92546 391 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-221ENST00000520265 TMEM106AQ96A25 262 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 SMIM19Q96E16 107 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 NR1H4Q96RI1 486 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-221ENST00000520265 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-221ENST00000520265 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
VEGFA-221ENST00000520265 TMEM89A2RUT3 159 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 PTGES3LE9PB15 166 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 K7N7A8 449 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 HSPB6O14558 160 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SH2D1BO14796 132 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 MT-ND2P03891 347 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 LGALS4P56470 323 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 FOXL1Q12952 345 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 C16orf87Q6PH81 154 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 OR8H2Q8N162 312 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 PARP16Q8N5Y8 322 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 OR51A2Q8NGJ7 313 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 GHSRQ92847 366 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SNX22Q96L94 193 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 DMRTB1Q96MA1 342 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 S100A13Q99584 98 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 CHIAQ9BZP6 476 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 DPAGT1Q9H3H5 408 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 CNOT2Q9NZN8 540 aaKnown RBP11.61□□□□□ -0.55
VEGFA-221ENST00000520265 CKLFQ9UBR5 152 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 ZNF281Q9Y2X9 895 aa11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SF3B6Q9Y3B4 125 aaKnown RBP11.61□□□□□ -0.55
VEGFA-221ENST00000520265 SIRT4Q9Y6E7 314 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-221ENST00000520265 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 TMEM82A0PJX8 343 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 CLDN34H7C241 214 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 LALBAP00709 142 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 HKR1P10072 659 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 UBE2E1P51965 193 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 TAS2R43P59537 309 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 DYNC1I2Q13409 638 aaKnown RBP11.6□□□□□ -0.55
VEGFA-221ENST00000520265 RSU1Q15404 277 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 PLA1AQ53H76 456 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 DDI2Q5TDH0 399 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 METAP1DQ6UB28 335 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-221ENST00000520265 OR10K1Q8NGX5 313 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 ORAI1Q96D31 301 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 PPA2Q9H2U2 334 aa11.6□□□□□ -0.55
VEGFA-221ENST00000520265 HEXA-AS1Q9H8Q6 139 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms