RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CCL1P22362 96 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 FKBP2P26885 142 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 NKX2-1P43699 371 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 CAMLGP49069 296 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 CCR6P51684 374 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 FUT6P51993 359 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ART1P52961 327 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 SUCLG1P53597 346 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RAB25P57735 213 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RRAS2P62070 204 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 BTG1P62324 171 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 PITPNAQ00169 270 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ENDOGQ14249 297 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 SF3B4Q15427 424 aaKnown RBP eCLIP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 FCN2Q15485 313 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 C1orf100Q5SVJ3 147 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 TMEM69Q5SWH9 247 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 HES3Q5TGS1 186 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RTN4RL2Q86UN3 420 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 C20orf196Q8IYI0 205 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ELMOD2Q8IZ81 293 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 TCTE3Q8IZS6 198 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 OR5AS1Q8N127 324 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 BATF2Q8N1L9 274 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 TOMM5Q8N4H5 51 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 OR51D1Q8NGF3 324 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 OR13C3Q8NGS6 347 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 LILRB1Q8NHL6 650 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 FAM3DQ96BQ1 224 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ADAT3Q96EY9 351 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF486Q96H40 463 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 C17orf77Q96MU5 243 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RBP7Q96R05 134 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 PIGQQ9BRB3 760 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 C7orf50Q9BRJ6 194 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 HES7Q9BYE0 225 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 PBOV1Q9GZY1 135 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 C1orf198Q9H425 327 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RIMS4Q9H426 269 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 MOB1AQ9H8S9 216 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 NEK6Q9HC98 313 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 HRASLSQ9HDD0 168 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 SLC17A5Q9NRA2 495 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 CENPMQ9NSP4 180 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 NUDT15Q9NV35 164 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 MCUBQ9NWR8 336 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 GLTPQ9NZD2 209 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF319Q9P2F9 582 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RABL2AQ9UBK7 228 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 HHLA2Q9UM44 414 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 RABL2BQ9UNT1 228 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 MRPS7Q9Y2R9 242 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 N6AMT1Q9Y5N5 214 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 NUBP2Q9Y5Y2 271 aa4.09□□□□□ -1.75
CTNNA1-212ENST00000518919 TRAV6A0A075B6T7 132 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 A0A087X0K7 114 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 A0A1W2PPI3 338 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ANKRD20A5PA0PJZ0 165 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 GGT3PA6NGU5 568 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 DNAJC9-AS1A6NH13 148 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF726A6NNF4 738 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 C21orf140B9A014 251 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 NPIPA2E9PIF3 369 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 NPIPA3F8WFD2 350 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 SMLR1H3BR10 107 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 SYT7O43581 403 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 CXCL13O43927 109 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 EIF1BO60739 113 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ATP6V1G1O75348 118 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 CBR3O75828 277 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 F10P00742 488 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 IGLV3-1P01715 115 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 TCRBP04435 133 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 P04436 131 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 CD2P06729 351 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ACAA1P09110 424 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 GABRA1P14867 456 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 MSR1P21757 451 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 GIFP27352 417 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 DLSTP36957 453 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 CX3CR1P49238 355 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 PRKXP51817 358 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF121P58317 390 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 GMFBP60983 142 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 HIST1H3AP68431 136 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 MRPS10P82664 201 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 QRFPP83859 136 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 EIF3IQ13347 325 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF260Q3ZCT1 412 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ZFP69Q49AA0 526 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 HIST2H3PS2Q5TEC6 136 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF318Q5VUA4 2279 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 TMEM244Q5VVB8 128 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 GLT8D1Q68CQ7 371 aa4.08□□□□□ -1.76
CTNNA1-212ENST00000518919 C11orf87Q6NUJ2 197 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms