RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 COX7A2P2O60397 106 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 MLNP12872 115 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 PTNP21246 168 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 TTMPQ5BVD1 217 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 ZNF660Q6AZW8 331 aaPredicted RBP2.08□□□□□ -2.08
SQLE-202ENST00000518604 CYP4Z1Q86W10 505 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 CPNE9Q8IYJ1 553 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 SYS1Q8N2H4 156 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 TNFRSF14Q92956 283 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 VAT1Q99536 393 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 UTP23Q9BRU9 249 aaKnown RBP2.08□□□□□ -2.08
SQLE-202ENST00000518604 PORCNQ9H237 461 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 NACADO15069 1562 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 C2orf16Q68DN1 1984 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 IGKV1OR2-108A0A075B7D4 117 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 TVP23AA6NH52 213 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 LEUTXA8MZ59 168 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 ENTPD6O75354 484 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 DHRS3O75911 302 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 CSTAP01040 98 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 CD8AP01732 235 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 RLN2P04090 185 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 DNASE1L1P49184 302 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 KLF3P57682 345 aaPredicted RBP2.07□□□□□ -2.08
SQLE-202ENST00000518604 CEACAM16Q2WEN9 425 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 CAVIN4Q5BKX8 364 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 PDZD11Q5EBL8 140 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 UBE2NLQ5JXB2 153 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 LINC00596Q86U02 117 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 AMN1Q8IY45 258 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 GAPTQ8N292 157 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 ACOT13Q9NPJ3 140 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 ZNF586Q9NXT0 402 aa2.07□□□□□ -2.08
SQLE-202ENST00000518604 MCTS1Q9ULC4 181 aaKnown RBP2.07□□□□□ -2.08
SQLE-202ENST00000518604 K7ERS5 55 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 ZMPSTE24O75844 475 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
SQLE-202ENST00000518604 DEKP35659 375 aaKnown RBP2.06□□□□□ -2.08
SQLE-202ENST00000518604 XKP51811 444 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 BNIP2Q12982 314 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 Q499Y3 187 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 PYDC2Q56P42 97 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 LIN9Q5TKA1 542 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 Q6ZQT7 251 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 OR8S1Q8NH09 359 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 ACTL9Q8TC94 416 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 LGALS14Q8TCE9 139 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 C22orf15Q8WYQ4 148 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 CDKL2Q92772 493 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 ADTRPQ96IZ2 230 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 NXF2Q9GZY0 626 aaKnown RBP2.06□□□□□ -2.08
SQLE-202ENST00000518604 DNAJC27Q9NZQ0 273 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 LOXHD1Q8IVV2 1947 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 THADAQ6YHU6 1953 aa2.06□□□□□ -2.08
SQLE-202ENST00000518604 ZSWIM8A7E2V4 1837 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 IGHV3-21A0A0B4J1V1 117 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 IGHV3-43A0A0B4J1X8 118 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 K7EN84 100 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 GYG2O15488 501 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 IGHV3-53P01767 116 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 HLA-AP01891 365 aaKnown RBP2.05□□□□□ -2.08
SQLE-202ENST00000518604 ELK4P28324 431 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 FOXA1P55317 472 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 CARD18P57730 90 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 SLC9A3R2Q15599 337 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 RESP18Q5W5W9 173 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 TMEM215Q68D42 235 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 GLYATQ6IB77 296 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 FAHD1Q6P587 224 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 WDR59Q6PJI9 974 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 SMARCD3Q6STE5 483 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 TCF24Q7RTU0 167 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 ATPAF2Q8N5M1 289 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 LY6G5BQ8NDX9 201 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 BPIFB6Q8NFQ5 453 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 PYURFQ96I23 114 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 CIB1Q99828 191 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 PLEKHA1Q9HB21 404 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 RHOFQ9HBH0 211 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 DIABLOQ9NR28 239 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 STMN3Q9NZ72 180 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 ICOSQ9Y6W8 199 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 NRCAMQ92823 1304 aa2.05□□□□□ -2.08
SQLE-202ENST00000518604 SETD1AO15047 1707 aaKnown RBP2.04□□□□□ -2.08
SQLE-202ENST00000518604 SYNGR2O43760 224 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 CECR9P0C854 216 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 SCGB1C2P0DMR2 95 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 IL12BP29460 328 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 CCL23P55773 120 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 GPR176Q14439 515 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 ZNF141Q15928 474 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 C6orf183Q5T699 404 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 DHX57Q6P158 1386 aaKnown RBP2.04□□□□□ -2.08
SQLE-202ENST00000518604 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 SCGB1C1Q8TD33 95 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
SQLE-202ENST00000518604 OTUB2Q96DC9 234 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 GLT1D1Q96MS3 346 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 COPS4Q9BT78 406 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 TXNIPQ9H3M7 391 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms