RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 RNF223E7ERA6 249 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 RFPL4AL1F8VTS6 287 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 PDCD5O14737 125 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 HTR3BO95264 441 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 BPNT1O95861 308 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 PAHP00439 452 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 KNG1P01042 644 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
CLN8-202ENST00000517514 SLC25A16P16260 332 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 PRKACAP17612 351 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SERPINA2P20848 420 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 EFNB2P52799 333 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SNU13P55769 128 aaKnown RBP8.23□□□□□ -1.09
CLN8-202ENST00000517514 ZNF146Q15072 292 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 RAB11BQ15907 218 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 NHLRC3Q5JS37 347 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SIGIRRQ6IA17 410 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 DCDC5Q6ZRR9 648 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 Q8IYB0 196 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 FAM216BQ8N7L0 139 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 OR5H6Q8NGV6 325 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 DYNC2LI1Q8TCX1 351 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SLC25A46Q96AG3 418 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 FAM3DQ96BQ1 224 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 CPNE2Q96FN4 548 aaPredicted RBP8.23□□□□□ -1.09
CLN8-202ENST00000517514 SDSLQ96GA7 329 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 CCL13Q99616 98 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 BCL7BQ9BQE9 202 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 METTL9Q9H1A3 318 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 DCSTAMPQ9H295 470 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 SEBOXQ9HB31 216 aaPredicted RBP8.23□□□□□ -1.09
CLN8-202ENST00000517514 PATZ1Q9HBE1 687 aaKnown RBP8.23□□□□□ -1.09
CLN8-202ENST00000517514 KAAG1Q9UBP8 84 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 FBLN5Q9UBX5 448 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 STEAP1Q9UHE8 339 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 DAPK2Q9UIK4 370 aa8.23□□□□□ -1.09
CLN8-202ENST00000517514 MALRD1Q5VYJ5 2156 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 TRAV38-1A0A0B4J264 116 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 ISPDA4D126 451 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 FOXI3A8MTJ6 420 aaPredicted RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 PSPNO60542 156 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 ZNF737O75373 536 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 CYB5AP00167 134 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 MGMTP16455 207 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 PRDX2P32119 198 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 PSMD7P51665 324 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 RBM11P57052 281 aaKnown RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 KRTAP1-1Q07627 177 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 LOXL1Q08397 574 aaPredicted RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 RSU1Q15404 277 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 MICBQ29980 383 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 SMIM21Q3B7S5 101 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 C17orf107Q6ZR85 190 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 OSR2Q8N2R0 312 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 PNLDC1Q8NA58 520 aaKnown RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 FAM46BQ96A09 425 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 TIMD4Q96H15 378 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 Q96M66 194 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 NICN1Q9BSH3 213 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 SHARPINQ9H0F6 387 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 LPAR5Q9H1C0 372 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 ZNF665Q9H7R5 613 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 LIN7BQ9HAP6 207 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 ELL3Q9HB65 397 aaPredicted RBP8.22□□□□□ -1.09
CLN8-202ENST00000517514 RHOFQ9HBH0 211 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 PLGRKTQ9HBL7 147 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 ACANP16112 2415 aa8.22□□□□□ -1.09
CLN8-202ENST00000517514 MAST4O15021 2626 aa8.21□□□□□ -1.09
CLN8-202ENST00000517514 TRAV24A0A0B4J272 114 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 H7C1Q1 480 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 GEMIN2O14893 280 aaKnown RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 SIGLEC5O15389 551 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 ADAM20O43506 726 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 MPIG6BO95866 241 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 OR2H2O95918 312 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 HAND1O96004 215 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 UBBP0CG47 229 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 ARSBP15848 533 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 USF1P22415 310 aaPredicted RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 LMO1P25800 156 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 ZFP36P26651 326 aaKnown RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 RPS27AP62979 156 aaKnown RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 PAX2Q02962 417 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 COL10A1Q03692 680 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 IL13RA2Q14627 380 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 TAF9Q16594 264 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 IDNKQ5T6J7 187 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 USP43Q70EL4 1123 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 OR2W3Q7Z3T1 314 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 PEG10Q86TG7 708 aaKnown RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 MUC20Q8N307 709 aaPredicted RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 FAM89BQ8N5H3 189 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 ZNRF1Q8ND25 227 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 LGALS14Q8TCE9 139 aa8.21□□□□□ -1.1
CLN8-202ENST00000517514 DACT3Q96B18 629 aaPredicted RBP8.21□□□□□ -1.1
CLN8-202ENST00000517514 SLC25A38Q96DW6 304 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms