RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ATP5C1P36542 298 aaKnown RBP-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 MAP3K8P41279 467 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 NDUFA8P51970 172 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 ZNF619Q8N2I2 560 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 TEX9Q8N6V9 391 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR5AU1Q8NGC0 362 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR5L1Q8NGL2 311 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 UBE2Q2Q8WVN8 375 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 CCDC127Q96BQ5 260 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 SH3YL1Q96HL8 342 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 HSFY1Q96LI6 401 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 C12orf66Q96MD2 445 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 C11orf70Q9BRQ4 267 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 NIPSNAP3BQ9BS92 247 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 BCL2L14Q9BZR8 327 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 ACTR3CQ9C0K3 210 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 NDEL1Q9GZM8 345 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 RHOJQ9H4E5 214 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 LPAR2Q9HBW0 351 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 AKAP7Q9P0M2 348 aaPredicted RBP-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 TAC3Q9UHF0 121 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 CFAP45Q9UL16 551 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 KCNIP3Q9Y2W7 256 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 FAM215AQ9Y5M1 114 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 COMMD3-BMI1R4GMX3 469 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 SCN3AQ9NY46 2000 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 ABCB11O95342 1321 aa-2.73□□□□□ -2.85
SNORA40.16-201ENST00000517238 TRBV6-8A0A0A6YYG3 113 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 A6NCN8 305 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR5H14A6NHG9 310 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 IBA57-AS1B1ANH7 110 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 SLC30A4O14863 429 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 PTP4A3O75365 173 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 NME6O75414 186 aaPredicted RBP-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 MT1AP04731 61 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 GYPCP04921 128 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 FGF1P05230 155 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 H2BFMP0C1H6 154 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 GGT1P19440 569 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 PGCP20142 388 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 CHI3L1P36222 383 aaPredicted RBP-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 GNALP38405 381 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 CAPZA2P47755 286 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 KCNJ3P48549 501 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 APOFQ13790 326 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 COG2Q14746 738 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR8G1Q15617 311 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TMEM241Q24JQ0 296 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 HYAL4Q2M3T9 481 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TP53I3Q53FA7 332 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TCP11X2Q5H9J9 407 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 CDKL4Q5MAI5 379 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 SPAG11AQ6PDA7 123 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 DAW1Q8N136 415 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 NPWQ8N729 165 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 GIPC3Q8TF64 312 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 HAUS1Q96CS2 278 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 EPSTI1Q96J88 318 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TBX5Q99593 518 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 MICU1Q9BPX6 476 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TSSK6Q9BXA6 273 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 COMMD5Q9GZQ3 224 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 EIF5A2Q9GZV4 153 aaKnown RBP-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 MAGEF1Q9HAY2 307 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 KCNIP2Q9NS61 270 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 ANO10Q9NW15 660 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 RDH8Q9NYR8 311 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 TTLL3Q9Y4R7 772 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 IQSEC2Q5JU85 1478 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 GCN1Q92616 2671 aaKnown RBP-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 RELNP78509 3460 aa-2.74□□□□□ -2.85
SNORA40.16-201ENST00000517238 DYNC1H1Q14204 4646 aaKnown RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 XKRY2A2RUG3 117 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 HTR3EA5X5Y0 456 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 GOLGA6L10A6NI86 522 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 WASH3PC4AMC7 463 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 UBFD1O14562 309 aaKnown RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 HTR1DP28221 377 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 HTR2AP28223 471 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 RPL37P61927 97 aaKnown RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 GRB2P62993 217 aaKnown RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 UGT2A3Q6UWM9 527 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 ZYG11AQ6WRX3 759 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 CATSPER4Q7RTX7 472 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 PSTKQ8IV42 348 aaKnown RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 FAM83FQ8NEG4 500 aaPredicted RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR7G3Q8NG95 312 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 OR9K2Q8NGE7 335 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 KIF18AQ8NI77 898 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 SUN5Q8TC36 379 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 ZFAND1Q8TCF1 268 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 SFXN5Q8TD22 340 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 CD200R1Q8TD46 325 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 MAL2Q969L2 176 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 RDH12Q96NR8 316 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 ALS2CR12Q96Q35 445 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 NHEJ1Q9H9Q4 299 aaPredicted RBP-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 PXMP2Q9NR77 195 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 SLC39A1Q9NY26 324 aa-2.75□□□□□ -2.85
SNORA40.16-201ENST00000517238 IL36GQ9NZH8 169 aa-2.75□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms