RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.27
SFXN1-211ENST00000515736 MCTS1Q9ULC4 181 aaKnown RBP7.09□□□□□ -1.27
SFXN1-211ENST00000515736 ANAPC10Q9UM13 185 aa7.09□□□□□ -1.27
SFXN1-211ENST00000515736 MRPS28Q9Y2Q9 187 aaKnown RBP7.09□□□□□ -1.27
SFXN1-211ENST00000515736 TIMM10BQ9Y5J6 103 aa7.09□□□□□ -1.27
SFXN1-211ENST00000515736 ARGFXA6NJG6 315 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SERPINE3A8MV23 424 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 XRCC2O43543 280 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SYNGR3O43761 229 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ZNF780AO75290 641 aaPredicted RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TRAPPC6AO75865 159 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SYNGR4O95473 234 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 HCKP08631 526 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TCEA1P23193 301 aaKnown RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 DNASE1P24855 282 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TAS2R31P59538 309 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 GMFBP60983 142 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 UNC119Q13432 240 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 RNPS1Q15287 305 aaKnown RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SF3B4Q15427 424 aaKnown RBP eCLIP7.08□□□□□ -1.282e-7■■■■□ 20.7
SFXN1-211ENST00000515736 RNASE10Q5GAN6 216 aaKnown RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 NSUN5P2Q63ZY6 315 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TMEM53Q6P2H8 277 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 Q6ZTK2 550 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 FAM57BQ71RH2 274 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SLC36A1Q7Z2H8 476 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 PEG10Q86TG7 708 aaKnown RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 NAA40Q86UY6 237 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ANGPTL5Q86XS5 388 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ZNF101Q8IZC7 436 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 OR5AS1Q8N127 324 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 FAM89BQ8N5H3 189 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ARRDC1Q8N5I2 433 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 OR13C9Q8NGT0 318 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 OR1F12Q8NHA8 337 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 LILRB4Q8NHJ6 448 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 HAS2Q92819 552 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 SNAPC3Q92966 411 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 GPR137Q96N19 417 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 S100A13Q99584 98 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TMEM59Q9BXS4 323 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 BEX2Q9BXY8 128 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 OPA3Q9H6K4 179 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 EXO5Q9H790 373 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ACKR4Q9NPB9 350 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 IFT46Q9NQC8 304 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 FBXL17Q9UF56 701 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 COL12A1Q99715 3063 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 USP9XQ93008 2570 aaPredicted RBP7.08□□□□□ -1.28
SFXN1-211ENST00000515736 MED13Q9UHV7 2174 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 ARHGAP21Q5T5U3 1957 aa7.08□□□□□ -1.28
SFXN1-211ENST00000515736 TUBAL3A6NHL2 446 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 FAM90A8PA6NJQ4 464 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 PRSS44E7EML9 344 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CXCL13O43927 109 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 NME2P1O60361 137 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 MRPL33O75394 65 aaKnown RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 KDM4BO94953 1096 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 OPN1LWP04000 364 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CD3DP04234 171 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 TPOP07202 933 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 FAM90A13PP0C7W8 464 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 FAM90A24PP0C7X0 464 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 ZNF708P17019 499 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CPT2P23786 658 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 LHX2P50458 406 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CCL11P51671 97 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 GNG2P59768 71 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 FGL1Q08830 312 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 OR1C1Q15619 314 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 TMEM255AQ5JRV8 349 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 VAX1Q5SQQ9 334 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 PHYHD1Q5SRE7 291 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 OTPQ5XKR4 325 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 ZNF474Q6S9Z5 364 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 GLIPR1L1Q6UWM5 242 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 YRDCQ86U90 279 aaKnown RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 PAQR4Q8N4S7 273 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 TMEM178AQ8NBL3 297 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 UXS1Q8NBZ7 420 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 SEMA6DQ8NFY4 1073 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 OR51S1Q8NGJ8 323 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 MRPS24Q96EL2 167 aaKnown RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 SAT2Q96F10 170 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 FAM71F1Q96KD3 344 aaPredicted RBP7.07□□□□□ -1.28
SFXN1-211ENST00000515736 GPER1Q99527 375 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 TM2D1Q9BX74 207 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 LPAR5Q9H1C0 372 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CRLF2Q9HC73 371 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 DEPPQ9NTK1 212 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 DECR2Q9NUI1 292 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 HSPB11Q9Y547 144 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 SHANK1Q9Y566 2161 aa7.07□□□□□ -1.28
SFXN1-211ENST00000515736 CACNA1DQ01668 2161 aa7.06□□□□□ -1.28
SFXN1-211ENST00000515736 IGHV3-15A0A0B4J1V0 119 aa7.06□□□□□ -1.28
SFXN1-211ENST00000515736 A0A0G2JMM0 328 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms