RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PTP4A1Q93096 173 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 RAB24Q969Q5 203 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 FBXO17Q96EF6 278 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM147Q9BVK8 224 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 KCNK15Q9H427 330 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CDC42EP2O14613 210 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 DHRS3O75911 302 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 F5P12259 2224 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 CDKN2AP42771 156 aaKnown RBP11.82□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF273Q14593 569 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 NSUN5P2Q63ZY6 315 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 OR4C3Q8NH37 302 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 MOB3AQ96BX8 217 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 FOXB1Q99853 325 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 LPAR5Q9H1C0 372 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 RER1O15258 196 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 CAPZBP47756 277 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 ATP6V1FQ16864 119 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 NCBP2LA6PVI3 153 aaKnown RBP11.82□□□□□ -0.52
TCOF1-214ENST00000515035 PDCD6O75340 191 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 CD99P14209 185 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 RNF165Q6ZSG1 346 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 NT5CQ8TCD5 201 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 TIMD4Q96H15 378 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 DEFB127Q9H1M4 99 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 WASHC3Q9Y3C0 194 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 RREB1Q92766 1687 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 FCGR3BO75015 233 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-214ENST00000515035 MBPP02686 304 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-214ENST00000515035 CCL11P51671 97 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 GNG3P63215 75 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-214ENST00000515035 SPATA46Q5T0L3 261 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 VAX2Q9UIW0 290 aa11.82□□□□□ -0.52
TCOF1-214ENST00000515035 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 PEX11BO96011 259 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 NGFP01138 241 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 SUCLG1P53597 346 aaKnown RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF793Q6ZN11 406 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 PARP11Q9NR21 331 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 HSF4Q9ULV5 492 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 KCNE1BA0A087WTH5 132 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 PRSS1P07477 247 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 PPP2CBP62714 309 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 PPP2CAP67775 309 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF770Q6IQ21 691 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 LILRA6Q6PI73 481 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 RPL7P18124 248 aaKnown RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 FUT7Q11130 342 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 DNAJB12Q9NXW2 375 aaKnown RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 A6NDN8 102 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 STAG3L2P0CL84 134 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 RPS4XP62701 263 aaKnown RBP11.81□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 TSPAN32Q96QS1 320 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
TCOF1-214ENST00000515035 C5orf52A6NGY3 159 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 SEMA7AO75326 666 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 CEACAM5P06731 702 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 ACAA2P42765 397 aaKnown RBP11.8□□□□□ -0.52
TCOF1-214ENST00000515035 TSPO2Q5TGU0 170 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM215Q68D42 235 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 Q8IYB0 196 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 YBX2Q9Y2T7 364 aaKnown RBP11.8□□□□□ -0.52
TCOF1-214ENST00000515035 OR2M5A3KFT3 312 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 C7orf66A4D0T2 115 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 PMS2P1A4D2B8 440 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 OPRK1P41145 380 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 MYBPHQ13203 477 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 KMT5CQ86Y97 462 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 RGP1Q92546 391 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-214ENST00000515035 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 ANGPTL4Q9BY76 406 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 TAAR3PQ9P1P4 343 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 OGG1O15527 345 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 SPNS3Q6ZMD2 512 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 OVCH2Q7RTZ1 564 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 OR4F17Q8NGA8 305 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 TRMT61AQ96FX7 289 aaKnown RBP11.8□□□□□ -0.52
TCOF1-214ENST00000515035 IER2Q9BTL4 223 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 MRM2Q9UI43 246 aaKnown RBP11.8□□□□□ -0.52
TCOF1-214ENST00000515035 SYNGR2O43760 224 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 SPINK9Q5DT21 86 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 RFESDQ8TAC1 157 aa11.8□□□□□ -0.52
TCOF1-214ENST00000515035 FAM74A7A6NL05 159 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms