RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CRABP1P29762 137 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 OTX1P32242 354 aaPredicted RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 CHRNA7P36544 502 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 HAAOP46952 286 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CX3CR1P49238 355 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SNU13P55769 128 aaKnown RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 SYNJ2BPP57105 145 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MTPNP58546 118 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 GNG3P63215 75 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 TNP2Q05952 138 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 DYRK1AQ13627 763 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 KPNB1Q14974 876 aaKnown RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 GRK1Q15835 563 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 Q5VSD8 79 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 PGM2L1Q6PCE3 622 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 DCXRQ7Z4W1 244 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MOB3BQ86TA1 216 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 THNSL2Q86YJ6 484 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 OR8H2Q8N162 312 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CSNK2A3Q8NEV1 391 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 OR9G4Q8NGQ1 327 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 C11orf45Q8TAV5 145 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 LZICQ8WZA0 190 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 TMEM106AQ96A25 262 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SPSB4Q96A44 273 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CREB3L1Q96BA8 519 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MS4A10Q96PG2 267 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 NMNAT3Q96T66 252 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 NDEL1Q9GZM8 345 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 OR51I2Q9H344 312 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZFAND3Q9H8U3 227 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 PARP11Q9NR21 331 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CHCHD3Q9NX63 227 aaKnown RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 VAPAQ9P0L0 249 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 B9D1Q9UPM9 204 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MPC1Q9Y5U8 109 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 IER3IP1Q9Y5U9 82 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SNX13Q9Y5W8 968 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 A3GALT2U3KPV4 340 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 TVP23AA6NH52 213 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 A6NIN4 97 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZNF736B4DX44 427 aaPredicted RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 DLGAP1O14490 977 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 DEFB4AO15263 64 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 GSC2O15499 205 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SPRY2O43597 315 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SOX15O60248 233 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZNF737O75373 536 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 IGLV1-40P01703 118 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CALCBP10092 127 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 PSKH1P11801 424 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 GNG10P50151 68 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CRYBA2P53672 197 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 PRRX1P54821 245 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 F2RL1P55085 397 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 IFFO1Q0D2I5 559 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 LTC4SQ16873 150 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ECSCRQ19T08 205 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SOHLH1Q5JUK2 328 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 OR52W1Q6IF63 320 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 DNM1P34Q6PK57 102 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZDHHC13Q8IUH4 622 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZDHHC21Q8IVQ6 265 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MSRB3Q8IXL7 192 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 Q8N402 240 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 TMEM217Q8N7C4 229 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SYT8Q8NBV8 401 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 TAMM41Q96BW9 452 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 FLYWCH2Q96CP2 140 aaKnown RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 WDR89Q96FK6 387 aaPredicted RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 TPD52L3Q96J77 140 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 CCDC134Q9H6E4 229 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 PLEKHA1Q9HB21 404 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZNF355PQ9NSJ1 428 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 MRPL22Q9NWU5 206 aaKnown RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 MDFICQ9P1T7 246 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 SLC23A1Q9UHI7 598 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 ZNF107Q9UII5 783 aaPredicted RBP2.43□□□□□ -2.02
CHD1-211ENST00000514344 PLA2G2DQ9UNK4 145 aa2.43□□□□□ -2.02
CHD1-211ENST00000514344 LOC102724200A0A096LPH7 203 aaPredicted RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 A0A1W2PPE3 182 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 ANKRD34BA5PLL1 514 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 AHCYL1O43865 530 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 MITFO75030 526 aaPredicted RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 HSPB1P04792 205 aaKnown RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 VAMP1P23763 118 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 DUSP1P28562 367 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 HSD11B1P28845 292 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 POLR2JP52435 117 aaKnown RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 MFAP2P55001 183 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 MEF2CQ06413 473 aaPredicted RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 BNIP1Q12981 228 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 MADCAM1Q13477 382 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 MRGPRG-AS1Q2M3A8 158 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 CD300EQ496F6 205 aaPredicted RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 LRRC23Q53EV4 343 aaPredicted RBP2.42□□□□□ -2.02
CHD1-211ENST00000514344 SLC35F1Q5T1Q4 408 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 LRIF1Q5T3J3 769 aa2.42□□□□□ -2.02
CHD1-211ENST00000514344 TBPL2Q6SJ96 375 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms