RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ERCC1P07992 297 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SOD3P08294 240 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 CXCL1P09341 107 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ADH6P28332 368 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SERPINF1P36955 418 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 RAP1AP62834 184 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SLAQ13239 276 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 OR1C1Q15619 314 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF550Q7Z398 422 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 KDM8Q8N371 416 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 GVQW1Q8N7I0 195 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 OR10H5Q8NGA6 315 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 OR51B6Q9H340 312 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 MLXQ9UH92 298 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 RAB22AQ9UL26 194 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SERINC4A6NH21 518 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 H7C1Q1 480 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 SLC31A2O15432 143 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ADAP1O75689 374 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TTRP02766 147 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 RBM39Q14498 530 aaKnown RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 OR7A5Q15622 319 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TOMM34Q15785 309 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 OR52W1Q6IF63 320 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 MRPL52Q86TS9 123 aaKnown RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 FAM219AQ8IW50 185 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 BPIFB2Q8N4F0 458 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ARSGQ96EG1 525 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 EXO5Q9H790 373 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 METTL7AQ9H8H3 244 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TAS2R4Q9NYW5 299 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TRAV18A0A075B6X5 111 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 FARS2O95363 451 aaKnown RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 SLC6A8P48029 635 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 CDC34P49427 236 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 AKR1C2P52895 323 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 AKR1C1Q04828 323 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 SRSF6Q13247 344 aaKnown RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 FIGNL1Q6PIW4 674 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 Q6ZS49 121 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 RBMXL3Q8N7X1 1067 aaKnown RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 COX18Q8N8Q8 333 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ZFP62Q8NB50 900 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 OR4C3Q8NH37 302 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF596Q8TC21 504 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 C2orf50Q96LR7 162 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 UBQLN4Q9NRR5 601 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 OR10H1Q9Y4A9 318 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM269A0A1B0GVZ9 245 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 A0A1B0GW55 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 A0A1W2PNV4 684 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF736B4DX44 427 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 E9PLN8 166 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L2P0CJ85 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L3P0CJ86 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L4P0CJ87 422 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L5P0CJ88 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L6P0CJ89 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4L7P0CJ90 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 PTNP21246 168 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TAS2R31P59538 309 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ERVFRD-1P60508 538 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 SLC25A53Q5H9E4 307 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 OR10K2Q6IF99 312 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 RNF152Q8N8N0 203 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ST6GALNAC3Q8NDV1 305 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 NOXO1Q8NFA2 376 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TERB2Q8NHR7 220 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF587Q96SQ5 575 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-205ENST00000514271 PHB2Q99623 299 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 C19orf12Q9NSK7 152 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 DUX4Q9UBX2 424 aa6.41□□□□□ -1.38
CLIP1-205ENST00000514271 IGKV1-9A0A0C4DH69 117 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 PRSS37A4D1T9 235 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 SEC14L6B5MCN3 397 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 MS4A18H0YCH9 400 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 RHBDL1O75783 438 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 GPANK1O95872 356 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
CLIP1-205ENST00000514271 PNMTP11086 282 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 OTX1P32242 354 aaPredicted RBP6.4□□□□□ -1.38
CLIP1-205ENST00000514271 SULT1A1P50225 295 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 PPT1P50897 306 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 MS4A18Q3C1V0 323 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 C1orf140Q5VVS0 124 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 RPL7L1Q6DKI1 246 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms