RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 HIST1H1BP16401 226 aaKnown RBP8.46□□□□□ -1.06
VCAN-210ENST00000513960 SFTPDP35247 375 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 NOVA1P51513 510 aaKnown RBP8.46□□□□□ -1.06
VCAN-210ENST00000513960 BEND4Q6ZU67 534 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 H1FNTQ75WM6 255 aaPredicted RBP8.46□□□□□ -1.06
VCAN-210ENST00000513960 SLC25A45Q8N413 288 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 ZNF441Q8N8Z8 693 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 ST8SIA1Q92185 356 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 WFIKKN1Q96NZ8 548 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 EGLN1Q9GZT9 426 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 WFDC1Q9HC57 220 aa8.46□□□□□ -1.06
VCAN-210ENST00000513960 VSTM2BA6NLU5 285 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 HLA-HP01893 362 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 FAHP16930 419 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 TAS2R60P59551 318 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 ADIRFQ15847 76 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 TCEAL6Q6IPX3 200 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 CMTM1Q8IZ96 169 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 COMMD1Q8N668 190 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 LFNGQ8NES3 379 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 OR10AD1Q8NGE0 317 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 NTNG2Q96CW9 530 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 DDIT4LQ96D03 193 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 SHDQ96IW2 340 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 CABLES2Q9BTV7 478 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 HDGFL3Q9Y3E1 203 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 HS3ST3B1Q9Y662 390 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 CCDC187A0A096LP49 1063 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 ANKUB1A6NFN9 424 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 ZNF705FA8MVS1 300 aaPredicted RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 SCGB1D1O95968 90 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 HPNP05981 417 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 APOBEC1P41238 236 aaKnown RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 HSF1Q00613 529 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 WDR74Q6RFH5 385 aaPredicted RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 OR52M1Q8NGK5 317 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 FRZBQ92765 325 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 UBE2ZQ9H832 354 aaPredicted RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 STARD10Q9Y365 291 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
VCAN-210ENST00000513960 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 RND3P61587 244 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 LRRC18Q8N456 261 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 GPHA2Q96T91 129 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 FAAP24Q9BTP7 215 aa8.45□□□□□ -1.06
VCAN-210ENST00000513960 IGHMP01871 453 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ATP6V0CP27449 155 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 P2RY1P47900 373 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 FGF8P55075 233 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 ERVFRD-1P60508 538 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 SPEM2Q0P670 501 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 PCK2Q16822 640 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 RHBDD2Q6NTF9 364 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 SLC22A25Q6T423 547 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 C1QL2Q7Z5L3 287 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF695Q8IW36 515 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 LGI3Q8N145 548 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 OR11L1Q8NGX0 322 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 PTX4Q96A99 478 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 TUBA4BQ9H853 241 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF160Q9HCG1 818 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 IGKV1D-8A0A087WSZ0 117 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 TRBV11-1A0A0K0K1C0 115 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 PTBP3O95758 552 aaKnown RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF41P51814 821 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 MLF1P58340 268 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 FOXK1P85037 733 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 FAM189A2Q15884 450 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 AADACL3Q5VUY0 350 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF705AQ6ZN79 300 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 OR8B12Q8NGG6 310 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 MUCL1Q96DR8 90 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 BCO1Q9HAY6 547 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 IFITM10A6NMD0 228 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 DHRS7CA6NNS2 312 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 TMEM14DPA8MWL7 114 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 SPRY1O43609 319 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 MBP02144 154 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 FGF7P21781 194 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 DUSP1P28562 367 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 KISS1Q15726 138 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 WDR25Q64LD2 544 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 RABEPKQ7Z6M1 372 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ANKRD37Q7Z713 158 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 OR5L2Q8NGL0 311 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 OR5C1Q8NGR4 320 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 TMEM37Q8WXS4 190 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 CPNE4Q96A23 557 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
VCAN-210ENST00000513960 OR6C1Q96RD1 312 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 PECRQ9BY49 303 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 ZNF442Q9H7R0 627 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 GPR173Q9NS66 373 aa8.44□□□□□ -1.06
VCAN-210ENST00000513960 TRIOO75962 3097 aa8.43□□□□□ -1.06
VCAN-210ENST00000513960 FTCDNL1E5RQL4 147 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms