RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KRT77Q7Z794 578 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 ANGPTL5Q86XS5 388 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 FOXRED2Q8IWF2 684 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 OR52N4Q8NGI2 321 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 CHST6Q9GZX3 395 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 PBOV1Q9GZY1 135 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 EFCAB1Q9HAE3 211 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 SEBOXQ9HB31 216 aaPredicted RBP8.58□□□□□ -1.04
DDX41-216ENST00000513562 ZNF286AQ9HBT8 521 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 GPR173Q9NS66 373 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 TAS2R1Q9NYW7 299 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.58□□□□□ -1.04
DDX41-216ENST00000513562 SIRT4Q9Y6E7 314 aaPredicted RBP8.58□□□□□ -1.04
DDX41-216ENST00000513562 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 FAM172BPA6NC97 362 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 CCRL2O00421 344 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 PSPNO60542 156 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 GMNNO75496 209 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 IGHA1P01876 353 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 H2AFXP16104 143 aaPredicted RBP8.57□□□□□ -1.04
DDX41-216ENST00000513562 ALOX5APP20292 161 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 GABRR1P24046 479 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 PEX2P28328 305 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 ERP29P30040 261 aaKnown RBP8.57□□□□□ -1.04
DDX41-216ENST00000513562 GDNFP39905 211 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 INSL3P51460 131 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 P2RX3P56373 397 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 ESRRGP62508 458 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 TRAPPC6BQ86SZ2 158 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 DRAM1Q8N682 238 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 RNF148Q8N7C7 305 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 AQP11Q8NBQ7 271 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 OTULINQ96BN8 352 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 CEP19Q96LK0 163 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 TM2D3Q9BRN9 247 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 OR51V1Q9H2C8 321 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 GAL3ST2Q9H3Q3 398 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 PCDHB16Q9NRJ7 776 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 MTCH1Q9NZJ7 389 aa8.57□□□□□ -1.04
DDX41-216ENST00000513562 NUFIP1Q9UHK0 495 aaKnown RBP8.57□□□□□ -1.04
DDX41-216ENST00000513562 A0A087X0M5 115 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 A0A1B0GX30 115 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 TNFRSF11BO00300 401 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 MGST3O14880 152 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 JTBO76095 146 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 HAND1O96004 215 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 HCKP08631 526 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 VEGFCP49767 419 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 PSME3P61289 254 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 CBX1P83916 185 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 FOXE3Q13461 319 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 PNLIPRP3Q17RR3 467 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 CXorf66Q5JRM2 361 aaPredicted RBP8.56□□□□□ -1.04
DDX41-216ENST00000513562 SLX4IPQ5VYV7 408 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 DEGS2Q6QHC5 323 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 OR56B4Q8NH76 319 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 CORO2AQ92828 525 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 SPAG4Q9NPE6 437 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 IL36RNQ9UBH0 155 aa8.56□□□□□ -1.04
DDX41-216ENST00000513562 TRGV10A0A0A0MS01 117 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 HMGB1P1B2RPK0 211 aaPredicted RBP8.55□□□□□ -1.04
DDX41-216ENST00000513562 AP4M1O00189 453 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 TOR1AO14656 332 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 CCNB2O95067 398 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 TTRP02766 147 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 TMEM11P17152 192 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 OR3A1P47881 315 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 ZNF91Q05481 1191 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 MFGE8Q08431 387 aaPredicted RBP8.55□□□□□ -1.04
DDX41-216ENST00000513562 FAM27D1Q5T7N8 215 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 Q6ZSR3 168 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 IQCF1Q8N6M8 205 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 EMG1Q92979 244 aaKnown RBP8.55□□□□□ -1.04
DDX41-216ENST00000513562 SLAMF9Q96A28 289 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 RPEQ96AT9 228 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 RNFT2Q96EX2 444 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 DGCR6LQ9BY27 220 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 CADM1Q9BY67 442 aaKnown RBP8.55□□□□□ -1.04
DDX41-216ENST00000513562 FGFR1OP2Q9NVK5 253 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 TAS2R3Q9NYW6 316 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 MAGEL2Q9UJ55 1249 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 LAMP5Q9UJQ1 280 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 SLC7A11Q9UPY5 501 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 U3KQV3 271 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 V9GYS6 101 aa8.55□□□□□ -1.04
DDX41-216ENST00000513562 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 A0A1W2PPI3 338 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 LINC01548A6NM66 108 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 DHRS7CA6NNS2 312 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 PRR32B1ATL7 298 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 PRODHO43272 600 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 ELANEP08246 267 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 PRRX1P54821 245 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 ROM1Q03395 351 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 GPR50Q13585 617 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 HES1Q14469 280 aa8.54□□□□□ -1.04
DDX41-216ENST00000513562 RBM39Q14498 530 aaKnown RBP8.54□□□□□ -1.04
DDX41-216ENST00000513562 ZNF829Q3KNS6 432 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms