RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	NPY4R	P50391	375 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HOXA4	Q00056	320 aa	Predicted RBP	13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SCN1B	Q07699	218 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IKZF1	Q13422	519 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IL13RA2	Q14627	380 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ZNF146	Q15072	292 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	LRRC10	Q5BKY1	277 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IDNK	Q5T6J7	187 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	FAM166A	Q6J272	317 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SPNS3	Q6ZMD2	512 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CHST4	Q8NCG5	386 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495		Q8NFD4	153 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR51D1	Q8NGF3	324 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR51T1	Q8NGJ9	327 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ANGPTL6	Q8NI99	470 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	AP3S1	Q92572	193 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ISOC1	Q96CN7	298 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SEH1L	Q96EE3	360 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	POM121	Q96HA1	1249 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TMEM59	Q9BXS4	323 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SELENOI	Q9C0D9	397 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	LIN7B	Q9HAP6	207 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SEBOX	Q9HB31	216 aa	Predicted RBP	13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CLN8	Q9UBY8	286 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MYO9A	B2RTY4	2548 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MAST4	O15021	2626 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	IGKV1D-17	A0A075B6S4	117 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495		H7C1Q1	480 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	MPIG6B	O95866	241 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	WNT2	P09544	360 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	PITPNB	P48739	271 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	RORC	P51449	518 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CLDN12	P56749	244 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	RBM11	P57052	281 aa	Known RBP	13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SCAND1	P57086	179 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	GNB2	P62879	340 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	MPV17L	Q2QL34	196 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	C2orf76	Q3KRA6	126 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	NHLRC3	Q5JS37	347 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	ZNF788	Q6ZQV5	615 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	ASCC1	Q8N9N2	400 aa	Known RBP	13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	TMEM185A	Q8NFB2	350 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM46B	Q96A09	425 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SLC25A28	Q96A46	364 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SLC25A46	Q96AG3	418 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SDSL	Q96GA7	329 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	BANF2	Q9H503	90 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SPACA1	Q9HBV2	294 aa		13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495	RSL24D1	Q9UHA3	163 aa	Known RBP	13.14	□□□□□ -0.31
SH3TC1-223	ENST00000513495		A0A0G2JK05	382 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A10P	A6NDY2	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A18P	A6NE21	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A16P	A6NEW6	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A20P	A6NIJ5	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A8P	A6NJQ4	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A7P	A6NKC0	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A22P	A8MWA6	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A12P	A8MX19	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A5P	A8MXJ8	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A23P	A8MXZ1	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	ZNF701	M0R085	212 aa	Predicted RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SMAD7	O15105	426 aa	Known RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	GPR37	O15354	613 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SIGLEC5	O15389	551 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FOXH1	O75593	365 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A15P	P0C7V4	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A13P	P0C7W8	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A14P	P0C7W9	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM90A24P	P0C7X0	464 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	VSIG8	P0DPA2	414 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SLC2A2	P11168	524 aa	Predicted RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	GABRR1	P24046	479 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	DUSP1	P28562	367 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CAV3	P56539	151 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	PIGY	Q3MUY2	71 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	LYPD2	Q6UXB3	125 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CD177	Q8N6Q3	437 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	KCTD12	Q96CX2	325 aa	Known RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	C1orf147	Q96MC9	270 aa	Predicted RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FAM234A	Q9H0X4	552 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	ABRACL	Q9P1F3	81 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	FBLN5	Q9UBX5	448 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	OR5V1	Q9UGF6	321 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	ZNF222	Q9UK12	451 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	RAB22A	Q9UL26	194 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CEPT1	Q9Y6K0	416 aa		13.13	□□□□□ -0.31
SH3TC1-223	ENST00000513495	METTL21EP	A6NDL7	271 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	TMEM14DP	A8MWL7	114 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495		F5H0A9	414 aa	Predicted RBP	13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495		H3BMQ9	156 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	SIRPB1	O00241	398 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	OR7C1	O76099	320 aa	Predicted RBP	13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	OR2H2	O95918	312 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CEBPD	P49716	269 aa	Predicted RBP	13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	GZMK	P49863	264 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	LMO4	P61968	165 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	COL10A1	Q03692	680 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	CD276	Q5ZPR3	534 aa		13.12	□□□□□ -0.31
SH3TC1-223	ENST00000513495	NR2C2AP	Q86WQ0	139 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms