RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-216ENST00000512683 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 F8VVB4 439 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 F8VWA3 439 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 EI24O14681 340 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 SYT7O43581 403 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ENTPD6O75354 484 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 GATBO75879 557 aaKnown RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 PEX2P28328 305 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 VDAC2P45880 294 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 RAB13P51153 203 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 CDC42P60953 191 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 COL10A1Q03692 680 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 TP53I3Q53FA7 332 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 SLC25A30Q5SVS4 291 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 HIST2H2BDQ6DRA6 164 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ZNF782Q6ZMW2 699 aaPredicted RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 RTN4RL2Q86UN3 420 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 BATF2Q8N1L9 274 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 DYNAPQ8N1N2 210 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
VEGFA-216ENST00000512683 RFKQ969G6 155 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 CREB3L1Q96BA8 519 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 CEP19Q96LK0 163 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 ZNF714Q96N38 554 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 OCSTAMPQ9BR26 566 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 OR14J1Q9UGF5 321 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 GLS2Q9UI32 602 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 LINC00312Q9Y6C7 94 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 SESN1Q9Y6P5 492 aa10.11□□□□□ -0.79
VEGFA-216ENST00000512683 FAM230AA0A1W2PPH8 454 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 HTR1DP28221 377 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 BRS3P32247 399 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 ATP6V1E1P36543 226 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 EDDM3BP56851 147 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 SNRPGP62308 76 aaKnown RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 BLCAPP62952 87 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 DYNC1I2Q13409 638 aaKnown RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 ZIK1Q3SY52 487 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 EGFL6Q8IUX8 553 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 RDH10Q8IZV5 341 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 ASCC1Q8N9N2 400 aaKnown RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 DNAAF1Q8NEP3 725 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 OR5AU1Q8NGC0 362 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 GPR61Q9BZJ8 451 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 CHST5Q9GZS9 411 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 LIN7BQ9HAP6 207 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 DPM3Q9P2X0 92 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 AASSQ9UDR5 926 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
VEGFA-216ENST00000512683 UBE2J1Q9Y385 318 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-216ENST00000512683 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 FUOMA2VDF0 154 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CYB5AP00167 134 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 PIPP12273 146 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CD33P20138 364 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 PAX6P26367 422 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ALDH3A2P51648 485 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 NANOS3P60323 173 aaKnown RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ACTA2P62736 377 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ACTG2P63267 376 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ACTC1P68032 377 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ACTA1P68133 377 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 SLC34A1Q06495 639 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 HABP2Q14520 560 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ZNF146Q15072 292 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ARSJQ5FYB0 599 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 VAX1Q5SQQ9 334 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 FDX2Q6P4F2 183 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CBR4Q8N4T8 237 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 OR2G2Q8NGZ5 317 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CAPSLQ8WWF8 208 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 RCC1LQ96I51 464 aaKnown RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 MBOAT4Q96T53 435 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 ADI1Q9BV57 179 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 CLEC7AQ9BXN2 247 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 TMEM133Q9H2Q1 129 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 PLEKHA1Q9HB21 404 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 RHOFQ9HBH0 211 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 FRRS1LQ9P0K9 344 aa10.09□□□□□ -0.79
VEGFA-216ENST00000512683 TSSC4Q9Y5U2 329 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-216ENST00000512683 IGHV2-26A0A0B4J1V2 119 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms