RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 C9orf152Q5JTZ5 239 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 ADAMTSL5Q6ZMM2 481 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 OR5A2Q8NGI9 324 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 ITFG2Q969R8 447 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 DPM3Q9P2X0 92 aa9.14□□□□□ -0.95
RNF4-216ENST00000511859 OR5B21A6NL26 309 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 FAM183AA6NL82 134 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 RIIAD1A6NNX1 92 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 ZAR1LA6NP61 321 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 DLGAP1O14490 977 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 NOS1APO75052 506 aaPredicted RBP9.13□□□□□ -0.95
RNF4-216ENST00000511859 JTBO76095 146 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 GYPBP06028 91 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 BLVRAP53004 296 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SLC35B1P78383 322 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 CRMP1Q14194 572 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SNAPC1Q16533 368 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 HAGHLQ6PII5 290 aaPredicted RBP9.13□□□□□ -0.95
RNF4-216ENST00000511859 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 ZNF676Q8N7Q3 588 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 POC1AQ8NBT0 407 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SLC37A3Q8NCC5 494 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 OR51L1Q8NGJ5 315 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 RNF133Q8WVZ7 376 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 CYGBQ8WWM9 190 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 RAX2Q96IS3 184 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 ZNF714Q96N38 554 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 OR8B4Q96RC9 309 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 NRIP2Q9BQI9 281 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 CLEC7AQ9BXN2 247 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 GABARAPL3Q9BY60 117 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SLC25A19Q9HC21 320 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 BRD7Q9NPI1 651 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SMPD3Q9NY59 655 aaPredicted RBP9.13□□□□□ -0.95
RNF4-216ENST00000511859 DNAJC27Q9NZQ0 273 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 HHLA2Q9UM44 414 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 BAIAP2Q9UQB8 552 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
RNF4-216ENST00000511859 SESN1Q9Y6P5 492 aa9.13□□□□□ -0.95
RNF4-216ENST00000511859 SH2D7A6NKC9 451 aaPredicted RBP9.12□□□□□ -0.95
RNF4-216ENST00000511859 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 SNRNP70P08621 437 aaKnown RBP9.12□□□□□ -0.95
RNF4-216ENST00000511859 CLUP10909 449 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 INSL3P51460 131 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 AQP4P55087 323 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
RNF4-216ENST00000511859 CEP78Q5JTW2 689 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 SLX4IPQ5VYV7 408 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 BCDIN3DQ7Z5W3 292 aaKnown RBP9.12□□□□□ -0.95
RNF4-216ENST00000511859 OR4P4Q8NGL7 312 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 OR8U1Q8NH10 309 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 FAM81AQ8TBF8 368 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ISOC1Q96CN7 298 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 IL4I1Q96RQ9 567 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 TMEM133Q9H2Q1 129 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 VCXQ9H320 206 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 FAM118AQ9NWS6 357 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 AASSQ9UDR5 926 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ENOPH1Q9UHY7 261 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 PRKYO43930 277 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 IFNGP01579 166 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 HMGN1P05114 100 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ZNF3P17036 446 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 MAP2K3P46734 347 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 EDDM3BP56851 147 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 KIR2DS1Q14954 304 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 C12orf73Q69YU5 71 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 GDPD3Q7L5L3 318 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.12□□□□□ -0.95
RNF4-216ENST00000511859 CPOQ8IVL8 374 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 PACRGLQ8N7B6 248 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 TCEANCQ8N8B7 351 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ZNF555Q8NEP9 628 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 BBS1Q8NFJ9 593 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ZNF596Q8TC21 504 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 CREB3L1Q96BA8 519 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 ABHD6Q9BV23 337 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 TEX12Q9BXU0 123 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 EDA2RQ9HAV5 297 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 OR14J1Q9UGF5 321 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 GMPPBQ9Y5P6 360 aa9.12□□□□□ -0.95
RNF4-216ENST00000511859 LOC100130705A0A1B0GUX0 176 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 hADV38S2A0JD32 116 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 LEUTXA8MZ59 168 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 PRR23D1E9PI22 279 aaPredicted RBP9.11□□□□□ -0.95
RNF4-216ENST00000511859 NXPH2O95156 264 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 LY86O95711 162 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 H2BFMP0C1H6 154 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 FAM106CPP0CH98 169 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 PRR23D2P0DMB1 279 aaPredicted RBP9.11□□□□□ -0.95
RNF4-216ENST00000511859 OPRL1P41146 370 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 VEGFCP49767 419 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 BDH1Q02338 343 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 TEX38Q6PEX7 206 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms