RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 LPLP06858 475 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
RAB40C-202ENST00000509637 KIR3DL2P43630 455 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 OR3A1P47881 315 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 OR12D2P58182 307 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 C12orf73Q69YU5 71 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF676Q8N7Q3 588 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 UTP4Q969X6 686 aaKnown RBP12.67□□□□□ -0.38
RAB40C-202ENST00000509637 LRGUKQ96M69 825 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 IL4I1Q96RQ9 567 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF556Q9HAH1 456 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 PITPNC1Q9UKF7 332 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 SNX5Q9Y5X3 404 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 LINC00312Q9Y6C7 94 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 TMEM14AQ9Y6G1 99 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 ENTPD6O75354 484 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 BCL3P20749 454 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 CALB2P22676 271 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 POLR2IP36954 125 aaKnown RBP12.66□□□□□ -0.38
RAB40C-202ENST00000509637 GRK1Q15835 563 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 ABCA11PQ4W5N1 156 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 DTX3Q8N9I9 347 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 NDNFQ8TB73 568 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 BCAS4Q8TDM0 211 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 ADAT3Q96EY9 351 aaPredicted RBP12.66□□□□□ -0.38
RAB40C-202ENST00000509637 CLEC7AQ9BXN2 247 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 SEBOXQ9HB31 216 aaPredicted RBP12.66□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 PAPOLBQ9NRJ5 636 aaKnown RBP12.66□□□□□ -0.38
RAB40C-202ENST00000509637 CLN6Q9NWW5 311 aa12.66□□□□□ -0.38
RAB40C-202ENST00000509637 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
RAB40C-202ENST00000509637 TCRBV4S1A1TA0A5B7 111 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 hADV38S2A0JD32 116 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 ZAR1LA6NP61 321 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 LY6LH3BQJ8 138 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 DYNC1I1O14576 645 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
RAB40C-202ENST00000509637 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
RAB40C-202ENST00000509637 ABHD12Q8N2K0 398 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
RAB40C-202ENST00000509637 CHST5Q9GZS9 411 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 MOB1AQ9H8S9 216 aa12.65□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 PEX14O75381 377 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 GABRR1P24046 479 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 HTR1DP28221 377 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 GLIPR1P48060 266 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 FUT6P51993 359 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 ISL1P61371 349 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 SPATA24Q86W54 205 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 YIPF7Q8N8F6 280 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 DPM3Q9P2X0 92 aa12.64□□□□□ -0.39
RAB40C-202ENST00000509637 TSSC4Q9Y5U2 329 aaPredicted RBP12.64□□□□□ -0.39
RAB40C-202ENST00000509637 SIRPB1O00241 398 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 SYT7O43581 403 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 BDH1Q02338 343 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 ZNF85Q03923 595 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 ZNF146Q15072 292 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
RAB40C-202ENST00000509637 DEFB121Q5J5C9 76 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 SLC7A6OSQ96CW6 309 aaPredicted RBP12.63□□□□□ -0.39
RAB40C-202ENST00000509637 NRBF2Q96F24 287 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 COQ2Q96H96 371 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 RBM14Q96PK6 669 aaKnown RBP12.63□□□□□ -0.39
RAB40C-202ENST00000509637 LIN7BQ9HAP6 207 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 POMPQ9Y244 141 aa12.63□□□□□ -0.39
RAB40C-202ENST00000509637 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 MGST3O14880 152 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 CGB3P0DN86 165 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 CGB7P0DN87 165 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 PF4V1P10720 104 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 CDK2P24941 298 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 AZGP1P25311 298 aaKnown RBP12.62□□□□□ -0.39
RAB40C-202ENST00000509637 PEX2P28328 305 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 CD34P28906 385 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
RAB40C-202ENST00000509637 P2RX3P56373 397 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 AESQ08117 197 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 DIAPH2-AS1Q14236 149 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 C17orf58Q2M2W7 97 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 Q6P435 159 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 ZNF329Q86UD4 541 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 MRPL41Q8IXM3 137 aaKnown RBP12.62□□□□□ -0.39
RAB40C-202ENST00000509637 CORO2AQ92828 525 aa12.62□□□□□ -0.39
RAB40C-202ENST00000509637 RFT1Q96AA3 541 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms