RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PLSCR5A0PG75 271 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 H0YL77 283 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 PDCD6O75340 191 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 MPV17P39210 176 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 CLEC18BQ6UXF7 455 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 EXTL1Q92935 676 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 ARL6Q9H0F7 186 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 WDR13Q9H1Z4 485 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
PHF3-209ENST00000509330 U3KQ87 197 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 ROS1P08922 2347 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 GRPP07492 148 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 CALCRP30988 508 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 SEC61A1P61619 476 aaKnown RBP12.74□□□□□ -0.37
PHF3-209ENST00000509330 OPCMLQ14982 345 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 ACTBL2Q562R1 376 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 OR5P3Q8WZ94 311 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 TRAF4Q9BUZ4 470 aaPredicted RBP12.74□□□□□ -0.37
PHF3-209ENST00000509330 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.74□□□□□ -0.375e-7■■■■□ 22.3
PHF3-209ENST00000509330 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
PHF3-209ENST00000509330 HEATR1Q9H583 2144 aaKnown RBP12.73□□□□□ -0.37
PHF3-209ENST00000509330 TRAV14DV4A0A0A6YYC5 116 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 TNFSF13O75888 250 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 FABP6P51161 128 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 WNT2BQ93097 391 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 STARD4Q96DR4 205 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 PROCRQ9UNN8 238 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 CST4P01036 141 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 SERPINF1P36955 418 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 EXOSC2Q13868 293 aaKnown RBP12.73□□□□□ -0.37
PHF3-209ENST00000509330 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 ZGRF1Q86YA3 2104 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 UBALD1Q8TB05 177 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 GP6Q9HCN6 339 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
PHF3-209ENST00000509330 CDK2AP1O14519 115 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 HOXB5P09067 269 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 FUT3P21217 361 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 FPR2P25090 351 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
PHF3-209ENST00000509330 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 ANKRD55Q3KP44 614 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 SP6Q3SY56 376 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 PHLDA2Q53GA4 152 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 TMEM128Q5BJH2 165 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 ZBTB37Q5TC79 503 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 Q6ZS92 163 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 MKXQ8IYA7 352 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 GPHA2Q96T91 129 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 TP53TG5Q9Y2B4 290 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 BET1O15155 118 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 MPZP25189 248 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 UCP2P55851 309 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 PSG7Q13046 419 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 RTL6Q6ICC9 239 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 WDR86Q86TI4 376 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 LHFPL1Q86WI0 220 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 FOXRED2Q8IWF2 684 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 WDR31Q8NA23 367 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 TECTBQ96PL2 329 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 CHD8Q9HCK8 2581 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 POM121CA8CG34 1229 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 CDIPTO14735 213 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 FCGR2CP31995 323 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 MRPL49Q13405 166 aaKnown RBP12.72□□□□□ -0.37
PHF3-209ENST00000509330 ARL6IP1Q15041 203 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 OR5A2Q8NGI9 324 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 C12orf4Q9NQ89 552 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 HSF4Q9ULV5 492 aa12.72□□□□□ -0.37
PHF3-209ENST00000509330 MEX3AA1L020 520 aaKnown RBP12.71□□□□□ -0.37
PHF3-209ENST00000509330 IL2RAP01589 272 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 TFF1P04155 84 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 CECR9P0C854 216 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 ZNF44P15621 663 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 NDUFA5Q16718 116 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 CISD2Q8N5K1 135 aaKnown RBP12.71□□□□□ -0.37
PHF3-209ENST00000509330 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.37
PHF3-209ENST00000509330 MFFQ9GZY8 342 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 MSL2Q9HCI7 577 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 FAM215AQ9Y5M1 114 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 ATRXP46100 2492 aa12.71□□□□□ -0.37
PHF3-209ENST00000509330 TEX46H3BTG2 121 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 DUS4LO95620 317 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms