RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 OLFML2AQ68BL7 652 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 TMPRSS11AQ6ZMR5 421 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 PNKDQ8N490 385 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 PACRGLQ8N7B6 248 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 BEND2Q8NDZ0 799 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 OR51A4Q8NGJ6 313 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 CYGBQ8WWM9 190 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 SEBOXQ9HB31 216 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-207ENST00000509102 RHOFQ9HBH0 211 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 RBFOX1Q9NWB1 397 aaKnown RBP15.24■□□□□ 0.03
UBE3D-207ENST00000509102 hADV38S2A0JD32 116 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 CLPSL1A2RUU4 121 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 F8VVB4 439 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 F8VWA3 439 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 MAGEB3O15480 346 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 SPRY1O43609 319 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF737O75373 536 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 ZFPL1O95159 310 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 RBP4P02753 201 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 CCL3L1P16619 93 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 BCL3P20749 454 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 DCKP27707 260 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 MEF2CQ06413 473 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-207ENST00000509102 EDDM3AQ14507 147 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 GRK1Q15835 563 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 OR13D1Q8NGV5 346 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 OR10AC1Q8NH08 325 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 APH1BQ8WW43 257 aa15.23■□□□□ 0.03
UBE3D-207ENST00000509102 TAF15Q92804 592 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE3D-207ENST00000509102 CHCHD3Q9NX63 227 aaKnown RBP15.23■□□□□ 0.03
UBE3D-207ENST00000509102 SH2D1BO14796 132 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 SULT1B1O43704 296 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 CD2P06729 351 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF728P0DKX0 622 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 COX7A1P24310 79 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 TGFBR2P37173 567 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 NPBWR2P48146 333 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF273Q14593 569 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF146Q15072 292 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 TAF9Q16594 264 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF691Q5VV52 312 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 SAXO1Q8IYX7 474 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 RFT1Q96AA3 541 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF714Q96N38 554 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 PDCD1LG2Q9BQ51 273 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 JAM3Q9BX67 310 aa15.22■□□□□ 0.03
UBE3D-207ENST00000509102 FGF20Q9NP95 211 aaPredicted RBP15.22■□□□□ 0.03
UBE3D-207ENST00000509102 EXOSC4Q9NPD3 245 aaKnown RBP15.22■□□□□ 0.03
UBE3D-207ENST00000509102 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.22■□□□□ 0.03
UBE3D-207ENST00000509102 FUOMA2VDF0 154 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 ALX3O95076 343 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 SNU13P55769 128 aaKnown RBP15.21■□□□□ 0.03
UBE3D-207ENST00000509102 RCN1Q15293 331 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 CCDC58Q4VC31 144 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF782Q6ZMW2 699 aaPredicted RBP15.21■□□□□ 0.03
UBE3D-207ENST00000509102 DHRSXQ8N5I4 330 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 PARP16Q8N5Y8 322 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 OR5D18Q8NGL1 313 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 VCXQ9H320 206 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 ZNF696Q9H7X3 374 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 HMG20AQ9NP66 347 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 GSTK1Q9Y2Q3 226 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 RNF114Q9Y508 228 aa15.21■□□□□ 0.03
UBE3D-207ENST00000509102 C17orf98A8MV24 154 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 MGST3O14880 152 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 WBP4O75554 376 aaKnown RBP15.2■□□□□ 0.02
UBE3D-207ENST00000509102 LIMS3P0CW19 117 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 LIMS4P0CW20 117 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 TMEM225BP0DP42 221 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 RAB3AP20336 220 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 DUSP1P28562 367 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 BMXP51813 675 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 RELBQ01201 579 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 IL18R1Q13478 541 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 AANATQ16613 207 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
UBE3D-207ENST00000509102 LRRC75BQ2VPJ9 315 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 HCP5Q6MZN7 132 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 RPL22L1Q6P5R6 122 aaKnown RBP15.2■□□□□ 0.02
UBE3D-207ENST00000509102 BRICD5Q6PL45 260 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 TRAPPC6BQ86SZ2 158 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 CNIH3Q8TBE1 160 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 GPR148Q8TDV2 347 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 WFDC12Q8WWY7 111 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 SPACA5Q96QH8 159 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 SSX3Q99909 188 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 CHST6Q9GZX3 395 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 RAB18Q9NP72 206 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 EXOSC1Q9Y3B2 195 aaKnown RBP15.2■□□□□ 0.02
UBE3D-207ENST00000509102 LINC00312Q9Y6C7 94 aa15.2■□□□□ 0.02
UBE3D-207ENST00000509102 TMEM82A0PJX8 343 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 E9PI62 339 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 H3BUX3 64 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 KDM4BO94953 1096 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 KISS1Q15726 138 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 PRR31Q5SQ13 230 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 FOXRED1Q96CU9 486 aaPredicted RBP15.19■□□□□ 0.02
UBE3D-207ENST00000509102 GPER1Q99527 375 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 ZNF649Q9BS31 505 aa15.19■□□□□ 0.02
UBE3D-207ENST00000509102 MEGF9Q9H1U4 602 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms