RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 TSPAN32Q96QS1 320 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 LRP12Q9Y561 859 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 RBM7Q9Y580 266 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 DOCK9Q9BZ29 2069 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ZFP92A6NM28 416 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 GPR89AB7ZAQ6 455 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 WDR1O75083 606 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 SRSF10O75494 262 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 GPR89BP0CG08 455 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 SRP14P37108 136 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 FGF8P55075 233 aaPredicted RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 SNU13P55769 128 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 BSXQ3C1V8 233 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 SLC8B1Q6J4K2 584 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ARHGEF39Q8N4T4 335 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 OR2C3Q8N628 320 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ABHD6Q9BV23 337 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ST6GALNAC5Q9BVH7 336 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 VN1R1Q9GZP7 353 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 RNF208Q9H0X6 261 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 OR10A5Q9H207 317 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ZNF701Q9NV72 531 aaPredicted RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 LRIT1Q9P2V4 623 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 R4GMQ9 66 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 GOLGA4Q13439 2230 aaKnown RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 K7EQS6 105 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 FGF17O60258 216 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 HLA-DQA2P01906 255 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 CCL5P13501 91 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 GABRA3P34903 492 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ARFRP1Q13795 201 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 TMEM187Q14656 261 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 CLLU1OSQ5K130 101 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 LDLRAD2Q5SZI1 272 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 LRTM2Q8N967 370 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 VN1R2Q8NFZ6 395 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 OR52M1Q8NGK5 317 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 VN1R17PQ8TDU5 208 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 LIPHQ8WWY8 451 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 C8orf44Q96CB5 159 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 LMLNQ96KR4 655 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 TRPM6Q9BX84 2022 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 OR51I2Q9H344 312 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 C11orf1Q9H5F2 150 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 GPR34Q9UPC5 381 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 ATG2AQ2TAZ0 1938 aa8.76□□□□□ -1.01
PDGFRA-207ENST00000509092 IGKV1D-42A0A075B6H8 117 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 IGSF23A1L1A6 192 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 FAM24AA6NFZ4 105 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CYR61O00622 381 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CTSBP07858 339 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CDKN1AP38936 164 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CTRLP40313 264 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 BTN3A2P78410 334 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 ZP2Q05996 745 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 SQSTM1Q13501 440 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 ZNF74Q16587 644 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 AGBL4Q5VU57 503 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 UNQ5815/PRO19632Q6UWF5 114 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 LGI3Q8N145 548 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 C10orf53Q8N6V4 93 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 OR14C36Q8NHC7 312 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 TMEM171Q8WVE6 324 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 APH1AQ96BI3 265 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 ANAPC16Q96DE5 110 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 C18orf12Q96KH6 178 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 SMIM7Q9BQ49 75 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 ZBP1Q9H171 429 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 TUBG2Q9NRH3 451 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 EMC9Q9Y3B6 208 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 OBSL1O75147 1896 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 A0A1B0GUS0 222 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 MPIG6BO95866 241 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CPMP14384 443 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CD33P20138 364 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 GCH1P30793 250 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 COMPP49747 757 aaPredicted RBP8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 TMEM50BP56557 158 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 LCN2P80188 198 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 MESP2Q0VG99 397 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 TMEM41BQ5BJD5 291 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 OTPQ5XKR4 325 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 CNKSR3Q6P9H4 555 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 LYZL2Q7Z4W2 148 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 MARCH3Q86UD3 253 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 OR4N5Q8IXE1 308 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 DOK4Q8TEW6 326 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 THAP3Q8WTV1 239 aaPredicted RBP8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 ARHGAP5-AS1Q96IT6 56 aa8.75□□□□□ -1.01
PDGFRA-207ENST00000509092 MRGPRX1Q96LB2 322 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms