RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PARP11Q9NR21 331 aa2.59□□□□□ -1.99
TRAPPC13-209ENST00000508304 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
TRAPPC13-209ENST00000508304 USE1Q9NZ43 259 aa2.59□□□□□ -1.99
TRAPPC13-209ENST00000508304 KIAA0232Q92628 1395 aa2.59□□□□□ -2
TRAPPC13-209ENST00000508304 LOC102724200A0A096LPH7 203 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-209ENST00000508304 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 COCHO43405 550 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 COX7A2P2O60397 106 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 MPZL2O60487 215 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 BRI3O95415 125 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 ORM1P02763 201 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 S100A6P06703 90 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 SLC2A1P11166 492 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 ACTR1BP42025 376 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 GCLMP48507 274 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 PRDX1Q06830 199 aaKnown RBP2.58□□□□□ -2
TRAPPC13-209ENST00000508304 LOXL1Q08397 574 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-209ENST00000508304 TEX30Q5JUR7 227 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 LAMTOR1Q6IAA8 161 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 TMEM25Q86YD3 366 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 ITPRIPQ8IWB1 547 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 OR5T1Q8NG75 326 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 ZNF420Q8TAQ5 688 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-209ENST00000508304 TWIST2Q8WVJ9 160 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 YIPF6Q96EC8 236 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 FMC1Q96HJ9 113 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 FAAP24Q9BTP7 215 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 WDR54Q9H977 334 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 FBXO6Q9NRD1 293 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-209ENST00000508304 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 TAS2R5Q9NYW4 299 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 LTBP1Q14766 1721 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 NRCAMQ92823 1304 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 MEGF6O75095 1541 aa2.58□□□□□ -2
TRAPPC13-209ENST00000508304 TRAV8-2A0A0B4J237 113 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 LOC389332A0A1B0GUA5 103 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 DAPL1A0PJW8 107 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 SMIM23A6NLE4 172 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 C9JQL5 133 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 GOLGA8KD6RF30 607 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 FTCDNL1E5RQL4 147 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 H3BP45 60 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 GOLGA8MH3BSY2 632 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 ADAP1O75689 374 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 KLHL2O95198 593 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 PSMG1O95456 288 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CYB5R3P00387 301 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 IGKV5-2P06315 115 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 SNRPAP09012 282 aaKnown RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 OCM2P0CE71 109 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 SPNP16150 400 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 OPRK1P41145 380 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CXCL12P48061 93 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CDC34P49427 236 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 PSMD7P51665 324 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 DLX6P56179 175 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 OR10A3P58181 314 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 TAS2R43P59537 309 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 UBE2IP63279 158 aaKnown RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 BAXQ07812 192 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CEACAM16Q2WEN9 425 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 NIPAL1Q6NVV3 410 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 TTC33Q6PID6 262 aaPredicted RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CLEC18BQ6UXF7 455 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 FAM183BPQ6ZVS7 135 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 ORMDL3Q8N138 153 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 C15orf56Q8N910 161 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 DNAAF3Q8N9W5 541 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 LINC01560Q8TB33 94 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 S100PBPQ96BU1 408 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 NEURL3Q96EH8 262 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 L3HYPDHQ96EM0 354 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 YPEL4Q96NS1 127 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 MARVELD1Q9BSK0 173 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 DHX35Q9H5Z1 703 aaKnown RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 IMP3Q9NV31 184 aaKnown RBP2.57□□□□□ -2
TRAPPC13-209ENST00000508304 C2orf16Q68DN1 1984 aa2.57□□□□□ -2
TRAPPC13-209ENST00000508304 CENPVL3A0A0U1RRI6 287 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 A8MWL6 223 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 KLRC4-KLRK1H3BQV0 150 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 PHYHO14832 338 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 SOCS1O15524 211 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 ZW10O43264 779 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 ATP8B1O43520 1251 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 UGT2B11O75310 529 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 DEXIO95424 95 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 APOEP02649 317 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 MAGEA2P43356 314 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 LGALS7P47929 136 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 STC1P52823 247 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 ITGB3BPQ13352 177 aaPredicted RBP2.56□□□□□ -2
TRAPPC13-209ENST00000508304 MED21Q13503 144 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 SSX1Q16384 188 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 EXOC3L4Q17RC7 722 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 RNASE13Q5GAN3 156 aaKnown RBP2.56□□□□□ -2
TRAPPC13-209ENST00000508304 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 ZNF684Q5T5D7 378 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 NXNL2Q5VZ03 156 aa2.56□□□□□ -2
TRAPPC13-209ENST00000508304 FAM45BPQ6NSW5 357 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms