RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
RNF4-210ENST00000508235 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
RNF4-210ENST00000508235 DUX4Q9UBX2 424 aa12.43□□□□□ -0.42
RNF4-210ENST00000508235 TRBV23-1A0A0A0MS06 115 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 SH2D1BO14796 132 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 PIN1P1O15428 100 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 ZNF780AO75290 641 aaPredicted RBP12.42□□□□□ -0.42
RNF4-210ENST00000508235 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 RGS9O75916 674 aaPredicted RBP12.42□□□□□ -0.42
RNF4-210ENST00000508235 HAND1O96004 215 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 MAS1P04201 325 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 FGF12P61328 243 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 GPR176Q14439 515 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 ARMCX4Q5H9R4 360 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 UBE2UQ5VVX9 321 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 CRIP3Q6Q6R5 217 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 ASCC1Q8N9N2 400 aaKnown RBP12.42□□□□□ -0.42
RNF4-210ENST00000508235 OR5D13Q8NGL4 314 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 PPP1R35Q8TAP8 253 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 TBC1D15Q8TC07 691 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 TMEM203Q969S6 136 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
RNF4-210ENST00000508235 ORAI1Q96D31 301 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 DCTN5Q9BTE1 182 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 METTL9Q9H1A3 318 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 CNTD2Q9H8S5 307 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
RNF4-210ENST00000508235 FN1P02751 2386 aaKnown RBP12.42□□□□□ -0.42
RNF4-210ENST00000508235 A0A1W2PPH5 198 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 K7N7A8 449 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 FCN3O75636 299 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 TNFAIP8O95379 198 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 AVPP01185 164 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 CSTBP04080 98 aaKnown RBP12.41□□□□□ -0.42
RNF4-210ENST00000508235 TFF1P04155 84 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 TK1P04183 234 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 SFTPBP07988 381 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 UCHL1P09936 223 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 SELLP14151 372 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 SRMP19623 302 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 OR3A4PP47883 348 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 CEBPDP49716 269 aaPredicted RBP12.41□□□□□ -0.42
RNF4-210ENST00000508235 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
RNF4-210ENST00000508235 COL10A1Q03692 680 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 HSD17B12Q53GQ0 312 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 METTL11BQ5VVY1 283 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 ASCL4Q6XD76 172 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 SNX22Q96L94 193 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
RNF4-210ENST00000508235 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 OPN4Q9UHM6 478 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 ING4Q9UNL4 249 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 GSTK1Q9Y2Q3 226 aa12.41□□□□□ -0.42
RNF4-210ENST00000508235 SF3B6Q9Y3B4 125 aaKnown RBP12.41□□□□□ -0.42
RNF4-210ENST00000508235 A0A1W2PQ09 198 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 CCRL2O00421 344 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 TOX4O94842 621 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 GALP22466 123 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 RANBP1P43487 201 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 INSL4Q14641 139 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
RNF4-210ENST00000508235 GDPD3Q7L5L3 318 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 KIR3DL3Q8N743 410 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 LY6G5BQ8NDX9 201 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 KPTNQ9Y664 436 aa12.4□□□□□ -0.42
RNF4-210ENST00000508235 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
RNF4-210ENST00000508235 MAGEA13PA6NCF6 341 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 HTR3BO95264 441 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 CALCBP10092 127 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 GABRR1P24046 479 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 PSMB9P28065 219 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
RNF4-210ENST00000508235 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
RNF4-210ENST00000508235 BLMHQ13867 455 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 IL13RA2Q14627 380 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 PDCD1Q15116 288 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 FGFRL1Q8N441 504 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 Q8NFD4 153 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 WDFY2Q96P53 400 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 IL36RNQ9UBH0 155 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 GHRLQ9UBU3 117 aa12.39□□□□□ -0.43
RNF4-210ENST00000508235 MRPS28Q9Y2Q9 187 aaKnown RBP12.39□□□□□ -0.43
RNF4-210ENST00000508235 SONP18583 2426 aaKnown RBP12.39□□□□□ -0.43
RNF4-210ENST00000508235 MTORP42345 2549 aa12.38□□□□□ -0.43
RNF4-210ENST00000508235 DEGS1O15121 323 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms