RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NKX2-4Q9H2Z4 354 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 METTL7AQ9H8H3 244 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PNRC2Q9NPJ4 139 aaKnown RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM242Q9NWH2 141 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PRR13Q9NZ81 148 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IL36GQ9NZH8 169 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 B3GAT1Q9P2W7 334 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C19orf25Q9UFG5 118 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 AK3Q9UIJ7 227 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DKKL1Q9UK85 242 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PIGLQ9Y2B2 252 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 RCL1Q9Y2P8 373 aaKnown RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PUS1Q9Y606 427 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PIAS3Q9Y6X2 628 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PDE4DIPQ5VU43 2346 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C2orf16Q68DN1 1984 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1W2PPE3 182 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 LRP5LA4QPB2 252 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A10PA6NDY2 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A8PA6NJQ4 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A7PA6NKC0 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A22PA8MWA6 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A12PA8MX19 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A23PA8MXZ1 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF732B4DXR9 585 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRDCB7Z8K6 153 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 LMO7DNF2Z398 122 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 H3BML4 177 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RPL36A-HNRNPH2H7BZ11 118 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 M0R135 149 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TP53I11O14683 189 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RER1O15258 196 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TOX3O15405 576 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 PHF1O43189 567 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZFAND5O76080 213 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 IFNA5P01569 189 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 OPN1MWP04001 364 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ARG1P05089 322 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SRP19P09132 144 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 CTXN2P0C2S0 81 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A13PP0C7W8 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FAM90A24PP0C7X0 464 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 OPN1MW2P0DN77 364 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 OPN1MW3P0DN78 364 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H1BP16401 226 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF17P17021 662 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ITGA3P26006 1051 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 CD38P28907 300 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ID4P47928 161 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 GLIPR1P48060 266 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RND3P61587 244 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST1H3AP68431 136 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 HLA-DRB3P79483 266 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 FOXO1Q12778 655 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 IL24Q13007 206 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 MALLQ13021 153 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 MFAP5Q13361 173 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SMAD4Q13485 552 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SHBQ15464 509 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 UBE2V2Q15819 145 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SRSF7Q16629 238 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 PLPPR5Q32ZL2 321 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM176BQ3YBM2 270 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ACSF3Q4G176 576 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 CARD17Q5XLA6 110 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ASCL4Q6XD76 172 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ETV3LQ6ZN32 361 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 C6orf201Q7Z4U5 140 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RABEPKQ7Z6M1 372 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 DPPA2Q7Z7J5 298 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF695Q8IW36 515 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SFTPA2Q8IWL1 248 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR1L3Q8NH93 324 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 HPSE2Q8WWQ2 592 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM54Q969K7 222 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TOMM40LQ969M1 308 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ERGIC1Q969X5 290 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SGK3Q96BR1 496 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RAB39BQ96DA2 213 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 BORCS8Q96FH0 119 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF799Q96GE5 643 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 P2RX4Q99571 388 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 RPP25Q9BUL9 199 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 C20orf24Q9BUV8 137 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 PARP12Q9H0J9 701 aaKnown RBP4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM222Q9H0R3 208 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 WFDC1Q9HC57 220 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 SLC2A9Q9NRM0 540 aa4.32□□□□□ -1.72
HMGB3P16-201ENST00000508037 LYRM2Q9NU23 88 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms